RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 CST1P01037 141 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 GSNP06396 782 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 GPX2P18283 190 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 TNFRSF4P43489 277 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 NKX2-5P52952 324 aaPredicted RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 RPS13P62277 151 aaKnown RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 ENPP2Q13822 863 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 DAG1Q14118 895 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 GK3PQ14409 553 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 RAB30Q15771 203 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 CST6Q15828 149 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 PLA2G4EQ3MJ16 856 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 NDUFAF5Q5TEU4 345 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 CPZQ66K79 652 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 ANKRD54Q6NXT1 300 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 TTC33Q6PID6 262 aaPredicted RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 ABRAXAS1Q6UWZ7 409 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 ZNF600Q6ZNG1 722 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 OXR1Q8N573 874 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 OR7A2PQ8NGA2 310 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 TMBIM1Q969X1 311 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 PYURFQ96I23 114 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 BHLHE41Q9C0J9 482 aaPredicted RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 MCOLN1Q9GZU1 580 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 AHSPQ9NZD4 102 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 ANKMY1Q9P2S6 941 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 PCDHB11Q9Y5F2 797 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 A0A087WXM4 84 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 PIPSLA2A3N6 862 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 G3V2T6 193 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 DLGAP1O14490 977 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 RGS13O14921 159 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 POLR1CO15160 346 aaPredicted RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 PCDH7O60245 1069 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 SULT1C4O75897 302 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 PRKD3O94806 890 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 CPSF4O95639 269 aaKnown RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 S100A6P06703 90 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 ENGP17813 658 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 ITIH1P19827 911 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 ARSFP54793 590 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 CDK3Q00526 305 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 SHHQ15465 462 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 PRAMEF14Q5SWL7 426 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 PRAMEF13Q5VWM6 474 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 LRRC56Q8IYG6 542 aaPredicted RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 CHPFQ8IZ52 775 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 CLEC4FQ8N1N0 589 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 RNF175Q8N4F7 328 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 ASCC1Q8N9N2 400 aaKnown RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 TFGQ92734 400 aaPredicted RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 COQ8BQ96D53 544 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 DMRT3Q9NQL9 472 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 ZNF282Q9UDV7 671 aaPredicted RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 ACSL5Q9ULC5 683 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 ATG2AQ2TAZ0 1938 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 A0A1W2PQ72 361 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 IGLON5A6NGN9 336 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 SCN2BO60939 215 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 SERPINA1P01009 418 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 PCCBP05166 539 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 PTX3P26022 381 aaPredicted RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 CDKN2CP42773 168 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 NR4A2P43354 598 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 WNT3P56703 355 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 RAE1P78406 368 aaKnown RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 ZNF763Q0D2J5 394 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 NPTX1Q15818 432 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 PXDC1Q5TGL8 231 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 RSBN1Q5VWQ0 802 aaPredicted RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 CES5AQ6NT32 575 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 ENPP6Q6UWR7 440 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 STK32CQ86UX6 486 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 ZCCHC7Q8N3Z6 543 aaKnown RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 MINDY2Q8NBR6 621 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 OR5K1Q8NHB7 308 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 TRUB1Q8WWH5 349 aaKnown RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 MRPL38Q96DV4 380 aaKnown RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 MTERF3Q96E29 417 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 AURKBQ96GD4 344 aaPredicted RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 RBM4BQ9BQ04 359 aaKnown RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 RBM4Q9BWF3 364 aaKnown RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 PITHD1Q9GZP4 211 aaPredicted RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 FBRSQ9HAH7 460 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 PELI2Q9HAT8 420 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 NTN4Q9HB63 628 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 PHPT1Q9NRX4 125 aaPredicted RBP7.88□□□□□ -1.15
UBR4-202ENST00000375224 SLC6A13Q9NSD5 602 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 PCDHGB4Q9UN71 923 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 PCDHGB5Q9Y5G0 923 aa7.88□□□□□ -1.15
UBR4-202ENST00000375224 ATP6V1G2-DDX39BF2Z307 99 aa7.87□□□□□ -1.15
UBR4-202ENST00000375224 RNASET2O00584 256 aaKnown RBP7.87□□□□□ -1.15
UBR4-202ENST00000375224 MID1O15344 667 aa7.87□□□□□ -1.15
UBR4-202ENST00000375224 YKT6O15498 198 aa7.87□□□□□ -1.15
UBR4-202ENST00000375224 GDI1P31150 447 aa7.87□□□□□ -1.15
UBR4-202ENST00000375224 DRD3P35462 400 aa7.87□□□□□ -1.15
UBR4-202ENST00000375224 VEZF1Q14119 521 aa7.87□□□□□ -1.15
UBR4-202ENST00000375224 VMACQ2NL98 169 aa7.87□□□□□ -1.15
UBR4-202ENST00000375224 CATSPEREQ5SY80 951 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms