RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 GPR26Q8NDV2 337 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 OR8J2Q8NGG1 315 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 MED30Q96HR3 178 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 HHATLQ9HCP6 504 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 C11orf16Q9NQ32 467 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 FAM120CQ9NX05 1096 aaKnown RBP13.15□□□□□ -0.3
USP49-201ENST00000373006 SLC38A8A6NNN8 435 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 SMLR1H3BR10 107 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 IGFBP1P08833 259 aaPredicted RBP13.14□□□□□ -0.31
USP49-201ENST00000373006 ITGA2P17301 1181 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 ATF6P18850 670 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 PTGS2P35354 604 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 CDC42P60953 191 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 PLAG1Q6DJT9 500 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 PAMR1Q6UXH9 720 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 NOXA1Q86UR1 476 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 TMEM203Q969S6 136 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 ZSCAN5AQ9BUG6 496 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 HTATIP2Q9BUP3 242 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 CHST8Q9H2A9 424 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 TRAPPC4Q9Y296 219 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 HMX3A6NHT5 357 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 MTX2O75431 263 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 TNFRSF21O75509 655 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 STC2O76061 302 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 ARHGEF15O94989 841 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 CCNB2O95067 398 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 ETHE1O95571 254 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 GASTP01350 101 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 ZDHHC11BP0C7U3 371 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 NKX3-2P78367 333 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 CHRNEQ04844 493 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 DSC1Q08554 894 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 XKR6Q5GH73 641 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 KLHL17Q6TDP4 642 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 AQP11Q8NBQ7 271 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 OR4A15Q8NGL6 344 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 OR4C15Q8NGM1 316 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 NFKBIDQ8NI38 313 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 CDCA4Q9BXL8 241 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 NARFLQ9H6Q4 476 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 GPATCH2Q9NW75 528 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 KCTD5Q9NXV2 234 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 ACSL6Q9UKU0 697 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 CHD5Q8TDI0 1954 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 A0A075B6Q4 140 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 OR6C70A6NIJ9 312 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 CA12O43570 354 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 ENTPD6O75354 484 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 CYP17A1P05093 508 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 HOXC5Q00444 222 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 IFI44LQ53G44 452 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.14□□□□□ -0.31
USP49-201ENST00000373006 C19orf48Q6RUI8 117 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 MSANTD1Q6ZTZ1 278 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 LRRC70Q7Z2Q7 622 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 C1orf52Q8N6N3 182 aaKnown RBP13.14□□□□□ -0.31
USP49-201ENST00000373006 L3MBTL4Q8NA19 623 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 SIMC1Q8NDZ2 872 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 OR5AK3PQ8NH89 298 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 SLC7A6Q92536 515 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 RNF170Q96K19 258 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 ABCB9Q9NP78 766 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 ASAH2Q9NR71 780 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 DNAJC27Q9NZQ0 273 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 SLC45A1Q9Y2W3 748 aa13.14□□□□□ -0.31
USP49-201ENST00000373006 C1orf226A1L170 272 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 CCDC182A6NF36 153 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 TBL1XO60907 577 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 DUSP11O75319 330 aaKnown RBP13.13□□□□□ -0.31
USP49-201ENST00000373006 SOX14O95416 240 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 ANXA4P09525 319 aaPredicted RBP13.13□□□□□ -0.31
USP49-201ENST00000373006 PRPH2P23942 346 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 CHMP24386 653 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 RORCP51449 518 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 CCL23P55773 120 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 B4GALNT1Q00973 533 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 HYAL2Q12891 473 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 GPAT3Q53EU6 434 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 LRRC73Q5JTD7 316 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 ADGRF1Q5T601 910 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 PAQR6Q6TCH4 344 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 VN1R5Q7Z5H4 357 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 CAMKK1Q8N5S9 505 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 SETD6Q8TBK2 473 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 WFDC5Q8TCV5 224 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 SRRQ9GZT4 340 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 C11orf54Q9H0W9 315 aaPredicted RBP13.13□□□□□ -0.31
USP49-201ENST00000373006 C3orf14Q9HBI5 128 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 DNAJC11Q9NVH1 559 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 CLN6Q9NWW5 311 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 PLXNA3P51805 1871 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 GNG14A0A1W2PPG7 69 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 CLEC2LP0C7M8 214 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 PXNP49023 591 aaPredicted RBP13.13□□□□□ -0.31
USP49-201ENST00000373006 PRIM2P49643 509 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 GATMP50440 423 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 RUNX1T1Q06455 604 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 BCL2L1Q07817 233 aa13.13□□□□□ -0.31
USP49-201ENST00000373006 ATP13A5Q4VNC0 1218 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms