RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 C16orf78Q8WTQ4 265 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 NCSTNQ92542 709 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 RSPRY1Q96DX4 576 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 NODALQ96S42 347 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 PCDHGB3Q9Y5G1 929 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 NRG2O14511 850 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 ACOT8O14734 319 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 SCAMP2O15127 329 aaKnown RBP6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 B3GALT2O43825 422 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 SEMA4FO95754 770 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 OR12D1P0DN82 309 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 DBTP11182 482 aaKnown RBP6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 ALDH3A2P51648 485 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 SIM1P81133 766 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 ZNF730Q6ZMV8 503 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 RTL10Q7L3V2 364 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 ECHDC3Q96DC8 303 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 MRPL38Q96DV4 380 aaKnown RBP6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 ABHD8Q96I13 439 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 HHIPQ96QV1 700 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 INSM2Q96T92 566 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 TPK1Q9H3S4 243 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 ATP6V1HQ9UI12 483 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 MRPS17Q9Y2R5 130 aaKnown RBP6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 HEBP2Q9Y5Z4 205 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 POM121BA6NF01 834 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 BTN3A3O00478 584 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 KPNA4O00629 521 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 LILRB3O75022 631 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 NME6O75414 186 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 PIM1P11309 404 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 PVRP15151 417 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 GGT1P19440 569 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 NDUFS1P28331 727 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 CTHP32929 405 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 ACSL1P33121 698 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 KRT20P35900 424 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 BLKP51451 505 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 YBX1P67809 324 aaKnown RBP6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 PRR23BQ6ZRT6 265 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 PLEKHM3Q6ZWE6 761 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 PDZD3Q86UT5 571 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 KLHDC8AQ8IYD2 350 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 SVOPQ8N4V2 548 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 OXR1Q8N573 874 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 FBXO15Q8NCQ5 510 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 TTLQ8NG68 377 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 FRS2Q8WU20 508 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 CDCA3Q99618 268 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 SH3GL3Q99963 347 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 RSPH9Q9H1X1 276 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 EPB41L1Q9H4G0 881 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 RHBDL2Q9NX52 303 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 THAP10Q9P2Z0 257 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 AASSQ9UDR5 926 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 SLC23A2Q9UGH3 650 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 RIMS3Q9UJD0 308 aa6.83□□□□□ -1.32
TGFBR3-202ENST00000370399 CACNA1IQ9P0X4 2223 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 LOC100130705A0A1B0GUX0 176 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 MITFO75030 526 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 SLCO2B1O94956 709 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 HNRNPCP07910 306 aaKnown RBP eCLIP6.82□□□□□ -1.322e-6■■□□□ 12
TGFBR3-202ENST00000370399 PAICSP22234 425 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 VSX2P58304 361 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 TIAL1Q01085 375 aaKnown RBP eCLIP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 CTBSQ01459 385 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 MADCAM1Q13477 382 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 ATP1A4Q13733 1029 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 SYT16Q17RD7 645 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 CNPY1Q3B7I2 92 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 KLHL12Q53G59 568 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 COQ5Q5HYK3 327 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 CLEC12AQ5QGZ9 265 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 KHDRBS2Q5VWX1 349 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 Q6ZSR6 202 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 USP53Q70EK8 1073 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 VN1R5Q7Z5H4 357 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 SLC34A3Q8N130 599 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 SVOPLQ8N434 492 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 OR52E1Q8NGJ3 308 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 TADA1Q96BN2 335 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 TMEM121BQ9BXQ6 578 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 TMEM168Q9H0V1 697 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 DMRT3Q9NQL9 472 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 TOR4AQ9NXH8 423 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 GIN1Q9NXP7 522 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 MRPS33Q9Y291 106 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 EP300Q09472 2414 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 C7orf72A4D263 438 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 H3BNX3 289 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 TOR1BO14657 336 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 B4GAT1O43505 415 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 MOSPD3O75425 235 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 THEGLP0DJG4 465 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 HSD3B1P14060 373 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 NPPBP16860 134 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 JUNDP17535 347 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 CCNA2P20248 432 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 HSD3B2P26439 372 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 DNAJA1P31689 397 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms