RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 EIF3FO00303 357 aaPredicted RBP16.81■□□□□ 0.28
CHUK-201ENST00000370397 WWP2O00308 870 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 ETFAP13804 333 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 ITGALP20701 1170 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 CNR2P34972 360 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 SPIBQ01892 262 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 LARS2Q15031 903 aaKnown RBP16.81■□□□□ 0.28
CHUK-201ENST00000370397 TEAD4Q15561 434 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 GPR33Q49SQ1 333 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 GDPGP1Q6ZNW5 385 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 NPAS3Q8IXF0 933 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 ANGPTL6Q8NI99 470 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 RASSF5Q8WWW0 418 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 TSEN34Q9BSV6 310 aaKnown RBP16.81■□□□□ 0.28
CHUK-201ENST00000370397 ARHGAP39Q9C0H5 1083 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.81■□□□□ 0.28
CHUK-201ENST00000370397 VPS29Q9UBQ0 182 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 PRG3Q9Y2Y8 225 aaPredicted RBP16.81■□□□□ 0.28
CHUK-201ENST00000370397 SMAD6O43541 496 aaKnown RBP16.81■□□□□ 0.28
CHUK-201ENST00000370397 DUSP11O75319 330 aaKnown RBP16.81■□□□□ 0.28
CHUK-201ENST00000370397 ENTPD6O75354 484 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 CCNB2O95067 398 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 HLA-DQB1P01920 261 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 GKP32189 559 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 HNMTP50135 292 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 CYP27C1Q4G0S4 372 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 TRAF7Q6Q0C0 670 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 DDX53Q86TM3 631 aaKnown RBP16.81■□□□□ 0.28
CHUK-201ENST00000370397 OR6K2Q8NGY2 324 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 SOSTQ9BQB4 213 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 MARCH5Q9NX47 278 aa16.81■□□□□ 0.28
CHUK-201ENST00000370397 ZNF840PA6NDX5 716 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 POU2F1P14859 743 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 NKX3-2P78367 333 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 SMARCB1Q12824 385 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 DUSP4Q13115 394 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 PRSS53Q2L4Q9 553 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 CRB2Q5IJ48 1285 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 ADGRF1Q5T601 910 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 ARMC12Q5T9G4 340 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 SAXO2Q658L1 398 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 FRMPD2BQ6IN97 320 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 ZNF783Q6ZMS7 281 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 C11orf65Q8NCR3 313 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 WDR36Q8NI36 951 aaKnown RBP16.8■□□□□ 0.28
CHUK-201ENST00000370397 SPPL2AQ8TCT8 520 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 MED30Q96HR3 178 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 TIGARQ9NQ88 270 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 DUSP12Q9UNI6 340 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 LOC105371267A0A1B0GV96 52 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 OR6C75A6NL08 312 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 NT5C1B-RDH14C9J2C7 533 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 GREM1O60565 184 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 OR1G1P47890 313 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 ALDH9A1P49189 494 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 SNRPGP62308 76 aaKnown RBP16.8■□□□□ 0.28
CHUK-201ENST00000370397 ZNF33BQ06732 778 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 TNK1Q13470 666 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 IFI44LQ53G44 452 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 TMPRSS11AQ6ZMR5 421 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 FAM217AQ8IXS0 508 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 TP53I13Q8NBR0 393 aaPredicted RBP16.8■□□□□ 0.28
CHUK-201ENST00000370397 TTC9Q92623 222 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 TMEM38AQ9H6F2 299 aa16.8■□□□□ 0.28
CHUK-201ENST00000370397 FAM227AF5H4B4 570 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 UGDHO60701 494 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 TP53P04637 393 aaPredicted RBP16.79■□□□□ 0.28
CHUK-201ENST00000370397 ITPKAP23677 461 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 IRS1P35568 1242 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 NSG1P42857 185 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 HBA1P69905 142 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 MRPS15P82914 257 aaKnown RBP16.79■□□□□ 0.28
CHUK-201ENST00000370397 CHIT1Q13231 466 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 LAMTOR1Q6IAA8 161 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 CADM2Q8N3J6 435 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 ZFAND1Q8TCF1 268 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 PLD4Q96BZ4 506 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 SAMD11Q96NU1 681 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 LYSMD1Q96S90 227 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 HCN4Q9Y3Q4 1203 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 CASP8AP2Q9UKL3 1982 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 NPIPB15A6NHN6 443 aaPredicted RBP16.79■□□□□ 0.28
CHUK-201ENST00000370397 RNASET2O00584 256 aaKnown RBP16.79■□□□□ 0.28
CHUK-201ENST00000370397 ZNF780AO75290 641 aaPredicted RBP16.79■□□□□ 0.28
CHUK-201ENST00000370397 YES1P07947 543 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 AZGP1P25311 298 aaKnown RBP16.79■□□□□ 0.28
CHUK-201ENST00000370397 CACTIN-AS1Q8N1I8 211 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 VWA5B2Q8N398 1253 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 NANOGP1Q8N7R0 232 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 NLGN4YQ8NFZ3 816 aaPredicted RBP16.79■□□□□ 0.28
CHUK-201ENST00000370397 CLIP3Q96DZ5 547 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 PIP5K1AQ99755 562 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 MAPKAP1Q9BPZ7 522 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 NMRK2Q9NPI5 230 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 SGTAO43765 313 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 HLA-DMAP28067 261 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 RORCP51449 518 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 GAS1P54826 345 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 CASP9P55211 416 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 RHOAP61586 193 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms