RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 PIAS3Q9Y6X2 628 aa13.21□□□□□ -0.29
SHC1-202ENST00000368445 CDK6Q00534 326 aa13.21□□□□□ -0.29
SHC1-202ENST00000368445 DGCR6Q14129 220 aa13.21□□□□□ -0.29
SHC1-202ENST00000368445 HEPACAMQ14CZ8 416 aa13.21□□□□□ -0.29
SHC1-202ENST00000368445 RAB30Q15771 203 aa13.21□□□□□ -0.29
SHC1-202ENST00000368445 DEPDC1Q5TB30 811 aa13.21□□□□□ -0.29
SHC1-202ENST00000368445 CEACAM20Q6UY09 585 aa13.21□□□□□ -0.29
SHC1-202ENST00000368445 PTOV1Q86YD1 416 aa13.21□□□□□ -0.29
SHC1-202ENST00000368445 CXorf40BQ96DE9 158 aa13.21□□□□□ -0.29
SHC1-202ENST00000368445 NRBF2Q96F24 287 aa13.21□□□□□ -0.29
SHC1-202ENST00000368445 DPH7Q9BTV6 452 aa13.21□□□□□ -0.29
SHC1-202ENST00000368445 MAPRE3Q9UPY8 281 aa13.21□□□□□ -0.29
SHC1-202ENST00000368445 CORO2BQ9UQ03 480 aa13.21□□□□□ -0.29
SHC1-202ENST00000368445 NDUFS4O43181 175 aa13.21□□□□□ -0.3
SHC1-202ENST00000368445 PRKRAO75569 313 aaKnown RBP13.21□□□□□ -0.3
SHC1-202ENST00000368445 BIRC2Q13490 618 aa13.21□□□□□ -0.3
SHC1-202ENST00000368445 CLCA4Q14CN2 919 aa13.21□□□□□ -0.3
SHC1-202ENST00000368445 SLC9B2Q86UD5 537 aa13.21□□□□□ -0.3
SHC1-202ENST00000368445 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.21□□□□□ -0.3
SHC1-202ENST00000368445 VANGL1Q8TAA9 524 aaPredicted RBP13.21□□□□□ -0.3
SHC1-202ENST00000368445 OSBPL10Q9BXB5 764 aa13.21□□□□□ -0.3
SHC1-202ENST00000368445 EQTNQ9NQ60 294 aa13.21□□□□□ -0.3
SHC1-202ENST00000368445 THUMPD1Q9NXG2 353 aaKnown RBP13.21□□□□□ -0.3
SHC1-202ENST00000368445 OBP2AQ9NY56 170 aa13.21□□□□□ -0.3
SHC1-202ENST00000368445 VNN3Q9NY84 501 aa13.21□□□□□ -0.3
SHC1-202ENST00000368445 BLOC1S6Q9UL45 172 aa13.21□□□□□ -0.3
SHC1-202ENST00000368445 SCN3AQ9NY46 2000 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 hCG_2014768A0A024R1R8 64 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 GSAPA4D1B5 854 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 PLPP1O14494 284 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 LCMT2O60294 686 aaKnown RBP13.2□□□□□ -0.3
SHC1-202ENST00000368445 CAPNS1P04632 268 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 FURINP09958 794 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 RPL3P39023 403 aaKnown RBP13.2□□□□□ -0.3
SHC1-202ENST00000368445 RPA4Q13156 261 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 C11orf74Q86VG3 221 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 DCP2Q8IU60 420 aaKnown RBP13.2□□□□□ -0.3
SHC1-202ENST00000368445 ZFP90Q8TF47 636 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 APOOQ9BUR5 198 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 RHBGQ9H310 441 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 FGF22Q9HCT0 170 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 IL1RAPQ9NPH3 570 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 CABIN1Q9Y6J0 2220 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 FOXD2O60548 495 aaPredicted RBP13.2□□□□□ -0.3
SHC1-202ENST00000368445 TRMUO75648 421 aaKnown RBP13.2□□□□□ -0.3
SHC1-202ENST00000368445 KRT75O95678 551 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 SPTBP11277 2137 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 CDH2P19022 906 aaPredicted RBP13.2□□□□□ -0.3
SHC1-202ENST00000368445 RAB28P51157 221 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 PPP2CBP62714 309 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 PPP2CAP67775 309 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 ROR2Q01974 943 aaKnown RBP13.2□□□□□ -0.3
SHC1-202ENST00000368445 GRSF1Q12849 480 aaKnown RBP eCLIP13.2□□□□□ -0.3
SHC1-202ENST00000368445 PMS2P3Q13401 168 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 LCTLQ6UWM7 567 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 RNF165Q6ZSG1 346 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 CALHM3Q86XJ0 350 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 METTL4Q8N3J2 472 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 ANKRD53Q8N9V6 530 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 TTC29Q8NA56 475 aaPredicted RBP13.2□□□□□ -0.3
SHC1-202ENST00000368445 OR52E1Q8NGJ3 308 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 OR8K5Q8NH50 307 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 THAP11Q96EK4 314 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 LINC00615Q96LM1 132 aaPredicted RBP13.2□□□□□ -0.3
SHC1-202ENST00000368445 CDCA3Q99618 268 aaPredicted RBP13.2□□□□□ -0.3
SHC1-202ENST00000368445 CTPS2Q9NRF8 586 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 SEC16AO15027 2179 aa13.2□□□□□ -0.3
SHC1-202ENST00000368445 TNFRSF11BO00300 401 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 FOXE1O00358 373 aaPredicted RBP13.19□□□□□ -0.3
SHC1-202ENST00000368445 PDPK1O15530 556 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 BCHEP06276 602 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 HTR1BP28222 390 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 ACSL1P33121 698 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 ZNF33BQ06732 778 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 UAP1L1Q3KQV9 507 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 FGD3Q5JSP0 725 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 CPZQ66K79 652 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 NUDT13Q86X67 352 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 CCL4L1Q8NHW4 92 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 RGMAQ96B86 450 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 FCRL4Q96PJ5 515 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 AMBRA1Q9C0C7 1298 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 BHLHE41Q9C0J9 482 aaPredicted RBP13.19□□□□□ -0.3
SHC1-202ENST00000368445 CAPN10Q9HC96 672 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 BTNL2Q9UIR0 455 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 SNX11Q9Y5W9 270 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 CKAP5Q14008 2032 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 CCDC88CQ9P219 2028 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 K7EQS6 105 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 CAPN5O15484 640 aaPredicted RBP13.19□□□□□ -0.3
SHC1-202ENST00000368445 TPST2O60704 377 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 GPR37L1O60883 481 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 PCSK6P29122 969 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 CTHP32929 405 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 CD47Q08722 323 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 APOFQ13790 326 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 RPS26P11Q5JNZ5 115 aaPredicted RBP13.19□□□□□ -0.3
SHC1-202ENST00000368445 BROXQ5VW32 411 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 EIF3MQ7L2H7 374 aaKnown RBP13.19□□□□□ -0.3
SHC1-202ENST00000368445 P3H2Q8IVL5 708 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms