RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 SFT2D3Q587I9 215 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 PAGE2BQ5JRK9 111 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 B3GNTL1Q67FW5 361 aaPredicted RBP17.81■□□□□ 0.44
CKS1B-203ENST00000368439 QSOX2Q6ZRP7 698 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 ATCAYQ86WG3 371 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 LAS2Q8IYD9 372 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 CISD2Q8N5K1 135 aaKnown RBP17.81■□□□□ 0.44
CKS1B-203ENST00000368439 CATSPER1Q8NEC5 780 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 OR2L5Q8NG80 312 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 DNAJB14Q8TBM8 379 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 ZNF473Q8WTR7 871 aaKnown RBP17.81■□□□□ 0.44
CKS1B-203ENST00000368439 CCT6BQ92526 530 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 BARD1Q99728 777 aaKnown RBP17.81■□□□□ 0.44
CKS1B-203ENST00000368439 RHOXF2Q9BQY4 288 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 NPLQ9BXD5 320 aaPredicted RBP17.81■□□□□ 0.44
CKS1B-203ENST00000368439 REXO4Q9GZR2 422 aaKnown RBP17.81■□□□□ 0.44
CKS1B-203ENST00000368439 NTNG1Q9Y2I2 539 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 CNTFP26441 200 aa17.8■□□□□ 0.44
CKS1B-203ENST00000368439 ALDH18A1P54886 795 aaKnown RBP17.8■□□□□ 0.44
CKS1B-203ENST00000368439 PFKFB4Q16877 469 aa17.8■□□□□ 0.44
CKS1B-203ENST00000368439 H3F3CQ6NXT2 135 aa17.8■□□□□ 0.44
CKS1B-203ENST00000368439 ABHD17CQ6PCB6 329 aa17.8■□□□□ 0.44
CKS1B-203ENST00000368439 PAPD4Q6PIY7 484 aaKnown RBP17.8■□□□□ 0.44
CKS1B-203ENST00000368439 TRMT10CQ7L0Y3 403 aaKnown RBP17.8■□□□□ 0.44
CKS1B-203ENST00000368439 UBE3DQ7Z6J8 389 aa17.8■□□□□ 0.44
CKS1B-203ENST00000368439 TEX9Q8N6V9 391 aa17.8■□□□□ 0.44
CKS1B-203ENST00000368439 EFCAB3Q8N7B9 438 aa17.8■□□□□ 0.44
CKS1B-203ENST00000368439 F2RL3Q96RI0 385 aa17.8■□□□□ 0.44
CKS1B-203ENST00000368439 EPB41L4BQ9H329 900 aa17.8■□□□□ 0.44
CKS1B-203ENST00000368439 L2HGDHQ9H9P8 463 aa17.8■□□□□ 0.44
CKS1B-203ENST00000368439 NECTIN3Q9NQS3 549 aa17.8■□□□□ 0.44
CKS1B-203ENST00000368439 PRDM7Q9NQW5 492 aa17.8■□□□□ 0.44
CKS1B-203ENST00000368439 ASF1BQ9NVP2 202 aa17.8■□□□□ 0.44
CKS1B-203ENST00000368439 PLA2G3Q9NZ20 509 aa17.8■□□□□ 0.44
CKS1B-203ENST00000368439 CLDN16Q9Y5I7 305 aa17.8■□□□□ 0.44
CKS1B-203ENST00000368439 FLNBO75369 2602 aaKnown RBP17.8■□□□□ 0.44
CKS1B-203ENST00000368439 COL12A1Q99715 3063 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 TCRBV16S1A1N1A0A5B0 115 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 TRIM49D1C9J1S8 452 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 RIPK2O43353 540 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 PRMT3O60678 531 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 VPS4BO75351 444 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 KRT38O76015 456 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 GFAPP14136 432 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 EPB42P16452 691 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 MAOAP21397 527 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 GNLYP22749 145 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 TSFMP43897 325 aaKnown RBP17.79■□□□□ 0.44
CKS1B-203ENST00000368439 PLA2G16P53816 162 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 AP2B1P63010 937 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 ESPL1Q14674 2120 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 ZNF169Q14929 603 aaPredicted RBP17.79■□□□□ 0.44
CKS1B-203ENST00000368439 HIST2H2ACQ16777 129 aaPredicted RBP17.79■□□□□ 0.44
CKS1B-203ENST00000368439 BTBD16Q32M84 506 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 HIST2H2AA3Q6FI13 130 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 GRHL2Q6ISB3 625 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 KLC3Q6P597 504 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 TMEM52Q8NDY8 209 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 OR7G3Q8NG95 312 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 M1APQ8TC57 530 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 HAS2Q92819 552 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 FAR2Q96K12 515 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 PTCHD1Q96NR3 888 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 NPAS2Q99743 824 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 MS4A8Q9BY19 250 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 VPS4AQ9UN37 437 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 IKBKGQ9Y6K9 419 aa17.79■□□□□ 0.44
CKS1B-203ENST00000368439 USP9XQ93008 2570 aaPredicted RBP17.78■□□□□ 0.44
CKS1B-203ENST00000368439 TCP11X1B4DZS4 312 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 E2F3O00716 465 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 SIX3O95343 332 aaPredicted RBP17.78■□□□□ 0.44
CKS1B-203ENST00000368439 COL6A2P12110 1019 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 HNRNPFP52597 415 aaKnown RBP17.78■□□□□ 0.44
CKS1B-203ENST00000368439 OR4D2P58180 307 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 SLC26A5P58743 744 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 TLR1Q15399 786 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 EXT1Q16394 746 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 MED27Q6P2C8 311 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 TRIM40Q6P9F5 258 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 ADGRD1Q6QNK2 874 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 TAOK1Q7L7X3 1001 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 SCUBE1Q8IWY4 988 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 TMEM151AQ8N4L1 468 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 CNDP1Q96KN2 507 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 SERINC2Q96SA4 455 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 LPAR4Q99677 370 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 RNF32Q9H0A6 362 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 MMP25Q9NPA2 562 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 PRDM9Q9NQV7 894 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 CPSF2Q9P2I0 782 aaKnown RBP17.78■□□□□ 0.44
CKS1B-203ENST00000368439 TSC22D4Q9Y3Q8 395 aa17.78■□□□□ 0.44
CKS1B-203ENST00000368439 SETXQ7Z333 2677 aaKnown RBP17.78■□□□□ 0.44
CKS1B-203ENST00000368439 EXOC1LA0A1B0GW35 172 aa17.77■□□□□ 0.44
CKS1B-203ENST00000368439 TGFBR3LH3BV60 316 aa17.77■□□□□ 0.44
CKS1B-203ENST00000368439 PSMD12O00232 456 aaPredicted RBP17.77■□□□□ 0.44
CKS1B-203ENST00000368439 WDPCPO95876 746 aa17.77■□□□□ 0.44
CKS1B-203ENST00000368439 RBP1P09455 135 aa17.77■□□□□ 0.44
CKS1B-203ENST00000368439 SBK3P0C264 359 aa17.77■□□□□ 0.44
CKS1B-203ENST00000368439 MYBL2P10244 700 aa17.77■□□□□ 0.44
CKS1B-203ENST00000368439 CERS1P27544 350 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms