RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 KCNN3Q9UGI6 736 aa18.88■□□□□ 0.61
TRIM58-201ENST00000366481 PCDHGB3Q9Y5G1 929 aa18.88■□□□□ 0.61
TRIM58-201ENST00000366481 NPIPB15A6NHN6 443 aaPredicted RBP18.87■□□□□ 0.61
TRIM58-201ENST00000366481 PSMA1P25786 263 aaKnown RBP18.87■□□□□ 0.61
TRIM58-201ENST00000366481 CYP4F8P98187 520 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 BNC1Q01954 994 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 TSTA3Q13630 321 aaPredicted RBP18.87■□□□□ 0.61
TRIM58-201ENST00000366481 EFR3AQ14156 821 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 SERPINA13PQ6UXR4 307 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 CDH24Q86UP0 819 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 VWA5B2Q8N398 1253 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 ANGPTL6Q8NI99 470 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 ING3Q9NXR8 418 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 PRRG1O14668 218 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 CDRT1O95170 752 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 DGKAP23743 735 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 MAGEA2P43356 314 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 TRIQKQ629K1 86 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 ADNP2Q6IQ32 1131 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 GPR65Q8IYL9 337 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 VN1R3Q9BXE9 311 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 PPT2Q9UMR5 302 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 RABL2BQ9UNT1 228 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 SLC22A14Q9Y267 594 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 I3L521 148 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 BTN3A3O00478 584 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 VEPH1Q14D04 833 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 GRAMD2AQ8IUY3 354 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 OR8H3Q8N146 312 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 STK40Q8N2I9 435 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 OR9Q1Q8NGQ5 310 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 MTERF1Q99551 399 aaKnown RBP18.87■□□□□ 0.61
TRIM58-201ENST00000366481 ZSCAN5AQ9BUG6 496 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 HDHD5Q9BXW7 423 aa18.87■□□□□ 0.61
TRIM58-201ENST00000366481 FAM240BA0A1B0GVZ2 78 aa18.86■□□□□ 0.61
TRIM58-201ENST00000366481 POLR1CO15160 346 aaPredicted RBP18.86■□□□□ 0.61
TRIM58-201ENST00000366481 TATDN3Q17R31 274 aa18.86■□□□□ 0.61
TRIM58-201ENST00000366481 TIGD4Q8IY51 512 aa18.86■□□□□ 0.61
TRIM58-201ENST00000366481 CRELD1Q96HD1 420 aa18.86■□□□□ 0.61
TRIM58-201ENST00000366481 ATP13A2Q9NQ11 1180 aa18.86■□□□□ 0.61
TRIM58-201ENST00000366481 CMAHPQ9Y471 501 aa18.86■□□□□ 0.61
TRIM58-201ENST00000366481 A0A1W2PQ45 241 aaPredicted RBP18.86■□□□□ 0.61
TRIM58-201ENST00000366481 A0A1W2PQY0 241 aa18.86■□□□□ 0.61
TRIM58-201ENST00000366481 B4DXG7 233 aa18.86■□□□□ 0.61
TRIM58-201ENST00000366481 INPPL1O15357 1258 aa18.86■□□□□ 0.61
TRIM58-201ENST00000366481 NUDT7P0C024 238 aa18.86■□□□□ 0.61
TRIM58-201ENST00000366481 CYP2A6P11509 494 aaPredicted RBP18.86■□□□□ 0.61
TRIM58-201ENST00000366481 POU6F2P78424 691 aaPredicted RBP18.86■□□□□ 0.61
TRIM58-201ENST00000366481 ATP13A5Q4VNC0 1218 aa18.86■□□□□ 0.61
TRIM58-201ENST00000366481 LGI4Q8N135 537 aa18.86■□□□□ 0.61
TRIM58-201ENST00000366481 PCNPQ8WW12 178 aaKnown RBP18.86■□□□□ 0.61
TRIM58-201ENST00000366481 TTLL2Q9BWV7 592 aa18.86■□□□□ 0.61
TRIM58-201ENST00000366481 SLC6A14Q9UN76 642 aa18.86■□□□□ 0.61
TRIM58-201ENST00000366481 KLK4Q9Y5K2 254 aa18.86■□□□□ 0.61
TRIM58-201ENST00000366481 B8ZZF3 427 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 PDE9AO76083 593 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 PKLRP30613 574 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 C5orf22Q49AR2 442 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.85■□□□□ 0.61
TRIM58-201ENST00000366481 CALHM3Q86XJ0 350 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 OR9Q2Q8NGE9 314 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 OR52E4Q8NGH9 312 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 NELL1Q92832 810 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 OARD1Q9Y530 152 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 FZD6O60353 706 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 COX7A2P14406 83 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 HOXB6P17509 224 aaKnown RBP18.85■□□□□ 0.61
TRIM58-201ENST00000366481 EPORP19235 508 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 RPS3P23396 243 aaKnown RBP eCLIP18.85■□□□□ 0.61
TRIM58-201ENST00000366481 ACRV1P26436 265 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 CCR7P32248 378 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 RPS5P46782 204 aaKnown RBP18.85■□□□□ 0.61
TRIM58-201ENST00000366481 CDC42P60953 191 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 PPIGQ13427 754 aaKnown RBP eCLIP18.85■□□□□ 0.61
TRIM58-201ENST00000366481 ZNF267Q14586 743 aaPredicted RBP18.85■□□□□ 0.61
TRIM58-201ENST00000366481 CLECL1Q8IZS7 167 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 RNF170Q96K19 258 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 A0A1W2PQL4 384 aaPredicted RBP18.85■□□□□ 0.61
TRIM58-201ENST00000366481 MAGEB17A8MXT2 336 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 TSPAN4O14817 238 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 C19orf57Q0VDD7 668 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 HNRNPA0Q13151 305 aaKnown RBP18.85■□□□□ 0.61
TRIM58-201ENST00000366481 DGKKQ5KSL6 1271 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 UBE2R2Q712K3 238 aaPredicted RBP18.85■□□□□ 0.61
TRIM58-201ENST00000366481 ZNF367Q7RTV3 350 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 SYT12Q8IV01 421 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 HS6ST3Q8IZP7 471 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 ZFAND1Q8TCF1 268 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 NIPSNAP1Q9BPW8 284 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 CLN6Q9NWW5 311 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 UCKL1Q9NWZ5 548 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 NLKQ9UBE8 527 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 PCDHB1Q9Y5F3 818 aa18.85■□□□□ 0.61
TRIM58-201ENST00000366481 H7C4K7 107 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 CLDN9O95484 217 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 TRBC1P01850 177 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 CD70P32970 193 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 GPRC6AQ5T6X5 926 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 LRRC66Q68CR7 880 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 DNAJB7Q7Z6W7 309 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms