RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 OR52K1Q8NGK4 314 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 OR4L1Q8NH43 312 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 KRT35Q92764 455 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 PTCHD1Q96NR3 888 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 OR1F2PQ96R84 312 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 PIP5K1AQ99755 562 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 YIPF4Q9BSR8 244 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 SLC6A15Q9H2J7 730 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 ANKHQ9HCJ1 492 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 ANO10Q9NW15 660 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 JKAMPQ9P055 326 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 LCMT1Q9UIC8 334 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 CAPN11Q9UMQ6 739 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 CLDN16Q9Y5I7 305 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 TGP01266 2768 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 A0A087X1B8 175 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 DVL2O14641 736 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 PRMT5O14744 637 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 SUSD5O60279 629 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 GALR3O60755 368 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 NIPSNAP2O75323 286 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 PSIP1O75475 530 aaKnown RBP7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 CYLC1P35663 651 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 SSR4P51571 173 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 NR1H2P55055 460 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 EIF3EP60228 445 aaKnown RBP7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 SRSF2Q01130 221 aaKnown RBP7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 TRIM14Q14142 442 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 STX1AQ16623 288 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 HYAL4Q2M3T9 481 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 ACSF3Q4G176 576 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 ACSBG2Q5FVE4 666 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 C10orf62Q5T681 223 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 TSTD2Q5T7W7 516 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 WLSQ5T9L3 541 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 PTRHD1Q6GMV3 140 aaKnown RBP7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 FIGNL1Q6PIW4 674 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 AFTPHQ6ULP2 937 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 RGS9BPQ6ZS82 235 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 HOMEZQ8IX15 550 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 KATNAL2Q8IYT4 538 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 RAB42Q8N4Z0 105 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 ZNF740Q8NDX6 193 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 OR6P1Q8NGX9 317 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 IGFBPL1Q8WX77 278 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 TBC1D20Q96BZ9 403 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 SCYL1Q96KG9 808 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 BIRC8Q96P09 236 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 SLC30A3Q99726 388 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 IL1RL2Q9HB29 575 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 SPTLC3Q9NUV7 552 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 FBXW2Q9UKT8 454 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 ERVK-11Q9UQG0 969 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 WIF1Q9Y5W5 379 aa7.83□□□□□ -1.16
HMGB1P39-201ENST00000366304 TRGV5A0A0B4J1U4 118 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 SERTM1A2A2V5 107 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 DEFB108AA8MXU0 73 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 C4orf51C9J302 202 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 ACOT7O00154 380 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 KCNAB3O43448 404 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 PSTPIP1O43586 416 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 MYO1DO94832 1006 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 SOX30O94993 753 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 EPPINO95925 133 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 F7P08709 466 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 CCL3P10147 92 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 RBP3P10745 1247 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 BMP4P12644 408 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 CNR1P21554 472 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 PIGAP37287 484 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 SLC1A1P43005 524 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 MAP2K3P46734 347 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 ABATP80404 500 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 SORDQ00796 357 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 TNK1Q13470 666 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 ARHGAP19Q14CB8 494 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 DEFB134Q4QY38 66 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 ANKRD20A4Q4UJ75 823 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 ODF2Q5BJF6 829 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 NDUFAF5Q5TEU4 345 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 AADACL2Q6P093 401 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 PODNL1Q6PEZ8 512 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 DARS2Q6PI48 645 aaKnown RBP7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 QSOX2Q6ZRP7 698 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 OTOAQ7RTW8 1153 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 ASPGQ86U10 573 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 CDKL3Q8IVW4 592 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 ZNF321PQ8N8H1 164 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 FBXO15Q8NCQ5 510 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 B3GNT7Q8NFL0 401 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 MCOLN3Q8TDD5 553 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 SMPDL3BQ92485 455 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 NCLNQ969V3 563 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 SARAFQ96BY9 339 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 RASL10BQ96S79 203 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 FAM173AQ9BQD7 235 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 AARSD1Q9BTE6 412 aaKnown RBP7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 TSSK1BQ9BXA7 367 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 LRRC40Q9H9A6 602 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 PROK2Q9HC23 129 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms