RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 RCHY1Q96PM5 261 aa-0.3□□□□□ -2.46
RNU6-54P-201ENST00000365563 ALKBH3Q96Q83 286 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-54P-201ENST00000365563 RPS6KC1Q96S38 1066 aa-0.3□□□□□ -2.46
RNU6-54P-201ENST00000365563 IL12RB2Q99665 862 aa-0.3□□□□□ -2.46
RNU6-54P-201ENST00000365563 FNDC11Q9BVV2 318 aa-0.3□□□□□ -2.46
RNU6-54P-201ENST00000365563 ZMYND12Q9H0C1 365 aa-0.3□□□□□ -2.46
RNU6-54P-201ENST00000365563 LIME1Q9H400 295 aa-0.3□□□□□ -2.46
RNU6-54P-201ENST00000365563 APMAPQ9HDC9 416 aa-0.3□□□□□ -2.46
RNU6-54P-201ENST00000365563 TIGARQ9NQ88 270 aa-0.3□□□□□ -2.46
RNU6-54P-201ENST00000365563 MIEF1Q9NQG6 463 aa-0.3□□□□□ -2.46
RNU6-54P-201ENST00000365563 ABCC13Q9NSE7 274 aa-0.3□□□□□ -2.46
RNU6-54P-201ENST00000365563 TBC1D13Q9NVG8 400 aa-0.3□□□□□ -2.46
RNU6-54P-201ENST00000365563 STK26Q9P289 416 aa-0.3□□□□□ -2.46
RNU6-54P-201ENST00000365563 RNF24Q9Y225 148 aa-0.3□□□□□ -2.46
RNU6-54P-201ENST00000365563 HBS1LQ9Y450 684 aaKnown RBP-0.3□□□□□ -2.46
RNU6-54P-201ENST00000365563 COL4A3BPQ9Y5P4 624 aa-0.3□□□□□ -2.46
RNU6-54P-201ENST00000365563 SLCO1B1Q9Y6L6 691 aa-0.3□□□□□ -2.46
RNU6-54P-201ENST00000365563 DGKBQ9Y6T7 804 aa-0.3□□□□□ -2.46
RNU6-54P-201ENST00000365563 PCDH11YQ9BZA8 1340 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 LOC390937A0A1W2PQ73 354 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 C7orf66A4D0T2 115 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 LRRD1A4D1F6 860 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 C2CD4DB7Z1M9 353 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 TSPAN4O14817 238 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 LDLRAD4O15165 306 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 B4GALT5O43286 388 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 FRAT2O75474 233 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 PDGFBP01127 241 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 SPARCP09486 303 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 NUDT17P0C025 328 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 SP9P0CG40 484 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 CCDC166P0CW27 439 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 HSD17B1P14061 328 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 MUC1P15941 1255 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 GLRA1P23415 457 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 NMBRP28336 390 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 EEF1DP29692 281 aaKnown RBP-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 GDI1P31150 447 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 PSMC2P35998 433 aaKnown RBP-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 PGM1P36871 562 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 CETN2P41208 172 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 XCR1P46094 333 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 SLC9A3P48764 834 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 PNLIPRP2P54317 469 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 TPD52P55327 224 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 EIF3BP55884 814 aaKnown RBP-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 RAG2P55895 527 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 NUP107P57740 925 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 ZNF415Q09FC8 603 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 BAMBIQ13145 260 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 SLC10A1Q14973 349 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 OPCMLQ14982 345 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 DUSP5Q16690 384 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 ZNF528Q3MIS6 628 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 DPCR1Q3MIW9 517 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 RABL6Q3YEC7 729 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 COX19Q49B96 90 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 GPR33Q49SQ1 333 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 C14orf28Q4W4Y0 310 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 ZNF789Q5FWF6 425 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 WDR45BQ5MNZ6 344 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 TEX35Q5T0J7 233 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 INTS11Q5TA45 600 aaKnown RBP-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 HCP5Q6MZN7 132 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 GIMAP6Q6P9H5 292 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 SMARCD3Q6STE5 483 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 PRSS55Q6UWB4 352 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 IL34Q6ZMJ4 242 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 TMEM26Q6ZUK4 368 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 TMPRSS11FQ6ZWK6 438 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 ARID3BQ8IVW6 561 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 MMD2Q8IY49 270 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 MTURNQ8N3F0 131 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 FAM71E2Q8N5Q1 922 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 SAMD12Q8N8I0 201 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 RAET1EQ8TD07 263 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 ANKRD49Q8WVL7 239 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 HTRA1Q92743 480 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 SYN2Q92777 582 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 SMARCE1Q969G3 411 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 SAAL1Q96ER3 474 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 DNAJC1Q96KC8 554 aaKnown RBP-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 BTBD9Q96Q07 612 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 OR6C1Q96RD1 312 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 CDRT15Q96T59 188 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 CDCA3Q99618 268 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 FAM173AQ9BQD7 235 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 NICN1Q9BSH3 213 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 FEM1AQ9BSK4 669 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 TTYH1Q9H313 450 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 EGLN3Q9H6Z9 239 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 TLE6Q9H808 572 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 DNAJC18Q9H819 358 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 TRIM45Q9H8W5 580 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 NMUR1Q9HB89 426 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 RETNQ9HD89 108 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 SIRT7Q9NRC8 400 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 SOHLH2Q9NX45 425 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 SPG21Q9NZD8 308 aa-0.31□□□□□ -2.46
RNU6-54P-201ENST00000365563 KCND2Q9NZV8 630 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms