RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 RHEBL1Q8TAI7 183 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 PMM1Q92871 262 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 WDR12Q9GZL7 423 aaKnown RBP17.89■□□□□ 0.45
CLIP2-202ENST00000361545 GJD2Q9UKL4 321 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 EIF1AYO14602 144 aaKnown RBP17.89■□□□□ 0.45
CLIP2-202ENST00000361545 ZNF208O43345 1280 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 SCO2O43819 266 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 HRH2P25021 359 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 TSPAN5P62079 268 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 REEP3Q6NUK4 255 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 PNPLA1Q8N8W4 532 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 ALPK1Q96QP1 1244 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 CLCC1Q96S66 551 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 TRPV5Q9NQA5 729 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 H3BSH0 61 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 ADAMTS4O75173 837 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 NUDT6P53370 316 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 ARF5P84085 180 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 CYBRD1Q53TN4 286 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 IDNKQ5T6J7 187 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 ZNF784Q8NCA9 323 aaPredicted RBP17.89■□□□□ 0.45
CLIP2-202ENST00000361545 HTRA1Q92743 480 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 BIRC7Q96CA5 298 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 CD180Q99467 661 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 SNTG1Q9NSN8 517 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 NUP98P52948 1817 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 TAF4O00268 1085 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 SOX1O00570 391 aaPredicted RBP17.89■□□□□ 0.45
CLIP2-202ENST00000361545 HCRTR2O43614 444 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 OR12D1P0DN82 309 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 IFI30P13284 250 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 DRD1P21728 446 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 CCNOP22674 350 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 ABATP80404 500 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 NIPAL1Q6NVV3 410 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 UCK2Q9BZX2 261 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 HNRNPA2B1P22626 353 aaKnown RBP17.88■□□□□ 0.45
CLIP2-202ENST00000361545 SLC6A4P31645 630 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 GRB7Q14451 532 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 ADNP2Q6IQ32 1131 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 PLET1Q6UQ28 207 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 GPAT4Q86UL3 456 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 PRODH2Q9UF12 536 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 POFUT2Q9Y2G5 429 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 SPO11Q9Y5K1 396 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 NPIPB15A6NHN6 443 aaPredicted RBP17.88■□□□□ 0.45
CLIP2-202ENST00000361545 PFKLP17858 780 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 TIA1P31483 386 aaKnown RBP eCLIP17.88■□□□□ 0.45
CLIP2-202ENST00000361545 MAP3K8P41279 467 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 RABIFP47224 123 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 SOX9P48436 509 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 SCRN3Q0VDG4 424 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 SMCO1Q147U7 214 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 NDUFA5Q16718 116 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 UNC50Q53HI1 259 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 ALG1LQ6GMV1 187 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 DNM1P34Q6PK57 102 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 KLHL36Q8N4N3 616 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 LGR4Q9BXB1 951 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 PRKACGP22612 351 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 KIAA0319Q5VV43 1072 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 C1orf94Q6P1W5 598 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 OR4N5Q8IXE1 308 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 RASGEF1AQ8N9B8 481 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 PGAP3Q96FM1 320 aaPredicted RBP17.88■□□□□ 0.45
CLIP2-202ENST00000361545 MALT1Q9UDY8 824 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 SYPP08247 313 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 SMSP52788 366 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 ABRAXAS2Q15018 415 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 DEFB110Q30KQ9 67 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 MCHR1Q99705 422 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.88■□□□□ 0.45
CLIP2-202ENST00000361545 TNFRSF10DQ9UBN6 386 aa17.88■□□□□ 0.45
CLIP2-202ENST00000361545 UQCRC2P22695 453 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 OR4D2P58180 307 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 C18orf21Q32NC0 220 aaPredicted RBP17.87■□□□□ 0.45
CLIP2-202ENST00000361545 RELL1Q8IUW5 271 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.87■□□□□ 0.45
CLIP2-202ENST00000361545 THEM6Q8WUY1 208 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 KLF16Q9BXK1 252 aaPredicted RBP17.87■□□□□ 0.45
CLIP2-202ENST00000361545 MCOLN1Q9GZU1 580 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 B3GAT2Q9NPZ5 323 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 A6NCN8 305 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 HIDE1A8MVS5 230 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 TMEM189-UBE2V1I3L0A0 370 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 TACSTD2P09758 323 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 AOC1P19801 751 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 OR12D2P58182 307 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 NXPE4Q6UWF7 544 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 ZFP3Q96NJ6 502 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 TSSK6Q9BXA6 273 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 IFT46Q9NQC8 304 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 ACTR3BQ9P1U1 418 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 RARRES3Q9UL19 164 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 TBX1O43435 398 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 JUPP14923 745 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 IL1RNP18510 177 aa17.87■□□□□ 0.45
CLIP2-202ENST00000361545 CD68P34810 354 aaPredicted RBP17.87■□□□□ 0.45
CLIP2-202ENST00000361545 MLLT1Q03111 559 aaPredicted RBP17.87■□□□□ 0.45
CLIP2-202ENST00000361545 OR4D1Q15615 310 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms