RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 ABHD13Q7L211 337 aa16.95■□□□□ 0.3
CLK2-202ENST00000361168 TRIM46Q7Z4K8 759 aa16.95■□□□□ 0.3
CLK2-202ENST00000361168 TRIM42Q8IWZ5 723 aa16.95■□□□□ 0.3
CLK2-202ENST00000361168 NLGN4XQ8N0W4 816 aa16.95■□□□□ 0.3
CLK2-202ENST00000361168 NLGN4YQ8NFZ3 816 aaPredicted RBP16.95■□□□□ 0.3
CLK2-202ENST00000361168 THOC1Q96FV9 657 aaKnown RBP16.95■□□□□ 0.3
CLK2-202ENST00000361168 QRFPRQ96P65 431 aa16.95■□□□□ 0.3
CLK2-202ENST00000361168 MESP1Q9BRJ9 268 aa16.95■□□□□ 0.3
CLK2-202ENST00000361168 BRF2Q9HAW0 419 aa16.95■□□□□ 0.3
CLK2-202ENST00000361168 ZNF304Q9HCX3 659 aa16.95■□□□□ 0.3
CLK2-202ENST00000361168 VPS29Q9UBQ0 182 aa16.95■□□□□ 0.3
CLK2-202ENST00000361168 ADGRE2Q9UHX3 823 aa16.95■□□□□ 0.3
CLK2-202ENST00000361168 PADI1Q9ULC6 663 aa16.95■□□□□ 0.3
CLK2-202ENST00000361168 URB1O60287 2271 aaKnown RBP16.95■□□□□ 0.3
CLK2-202ENST00000361168 ARHGAP10A1A4S6 786 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 NSA2O95478 260 aaKnown RBP16.94■□□□□ 0.3
CLK2-202ENST00000361168 MDH1P40925 334 aaKnown RBP16.94■□□□□ 0.3
CLK2-202ENST00000361168 EMP3P54852 163 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 SF3A3Q12874 501 aaKnown RBP eCLIP16.94■□□□□ 0.33e-6■■■□□ 17.3
CLK2-202ENST00000361168 HERC3Q15034 1050 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 NDUFA9Q16795 377 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 MLIPQ5VWP3 458 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 OR4C11Q6IEV9 310 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 TRIM40Q6P9F5 258 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 FAM198BQ6UWH4 519 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 VASH2Q86V25 355 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 PRSS58Q8IYP2 241 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 ACOT4Q8N9L9 421 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 COL26A1Q96A83 441 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 ZNF578Q96N58 590 aaPredicted RBP16.94■□□□□ 0.3
CLK2-202ENST00000361168 LRFN5Q96NI6 719 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 KCNC2Q96PR1 638 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 ACSL6Q9UKU0 697 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 BOD1L1Q8NFC6 3051 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 WASHC1A8K0Z3 465 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.94■□□□□ 0.3
CLK2-202ENST00000361168 FAM227AF5H4B4 570 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 POLR3GO15318 223 aaPredicted RBP16.94■□□□□ 0.3
CLK2-202ENST00000361168 TMPRSS11DO60235 418 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 KLK3P07288 261 aaPredicted RBP16.94■□□□□ 0.3
CLK2-202ENST00000361168 HIST1H1TP22492 207 aaPredicted RBP16.94■□□□□ 0.3
CLK2-202ENST00000361168 ATP5A1P25705 553 aaKnown RBP16.94■□□□□ 0.3
CLK2-202ENST00000361168 SERPINB1P30740 379 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 RPS18P62269 152 aaKnown RBP16.94■□□□□ 0.3
CLK2-202ENST00000361168 SPDYAQ5MJ70 313 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 ARHGAP40Q5TG30 622 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 YOD1Q5VVQ6 348 aaPredicted RBP16.94■□□□□ 0.3
CLK2-202ENST00000361168 COMMD6Q7Z4G1 85 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 LAPTM4BQ86VI4 370 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 WDR75Q8IWA0 830 aaKnown RBP16.94■□□□□ 0.3
CLK2-202ENST00000361168 CACNA2D3Q8IZS8 1091 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 C1orf52Q8N6N3 182 aaKnown RBP16.94■□□□□ 0.3
CLK2-202ENST00000361168 CT55Q8WUE5 264 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 FGF11Q92914 225 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 UCN3Q969E3 161 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 RGMAQ96B86 450 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 B3GNT4Q9C0J1 378 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 CROTQ9UKG9 612 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 MRPS18BQ9Y676 258 aaKnown RBP16.94■□□□□ 0.3
CLK2-202ENST00000361168 NBEAQ8NFP9 2946 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 SCN2AQ99250 2005 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 CCDC88CQ9P219 2028 aa16.94■□□□□ 0.3
CLK2-202ENST00000361168 PRKRAO75569 313 aaKnown RBP16.93■□□□□ 0.3
CLK2-202ENST00000361168 CDC123O75794 336 aaPredicted RBP16.93■□□□□ 0.3
CLK2-202ENST00000361168 KLK1P06870 262 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 HBQ1P09105 142 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 TCN2P20062 427 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 SSR2P43308 183 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 RAP1GDS1P52306 607 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 RAE1P78406 368 aaKnown RBP16.93■□□□□ 0.3
CLK2-202ENST00000361168 PHEXP78562 749 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 CSTF3Q12996 717 aaKnown RBP16.93■□□□□ 0.3
CLK2-202ENST00000361168 CLN3Q13286 438 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 RFTN2Q52LD8 501 aaPredicted RBP16.93■□□□□ 0.3
CLK2-202ENST00000361168 TMEM35AQ53FP2 167 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 XKR7Q5GH72 579 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 PROKR1Q8TCW9 393 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 C19orf60Q96EN9 201 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 C11orf24Q96F05 449 aaPredicted RBP16.93■□□□□ 0.3
CLK2-202ENST00000361168 PEX11GQ96HA9 241 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 FAR2Q96K12 515 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 C7orf26Q96N11 449 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 SERPINI1Q99574 410 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 YIPF2Q9BWQ6 316 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 CCDC86Q9H6F5 360 aaKnown RBP16.93■□□□□ 0.3
CLK2-202ENST00000361168 IFT80Q9P2H3 777 aaPredicted RBP16.93■□□□□ 0.3
CLK2-202ENST00000361168 TRPC4Q9UBN4 977 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 IL17BQ9UHF5 180 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 PPT2Q9UMR5 302 aa16.93■□□□□ 0.3
CLK2-202ENST00000361168 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.93■□□□□ 0.3
CLK2-202ENST00000361168 ITPR1Q14643 2758 aa16.92■□□□□ 0.3
CLK2-202ENST00000361168 URADA6NGE7 173 aa16.92■□□□□ 0.3
CLK2-202ENST00000361168 TAF4O00268 1085 aa16.92■□□□□ 0.3
CLK2-202ENST00000361168 ZNF195O14628 629 aa16.92■□□□□ 0.3
CLK2-202ENST00000361168 LSM1O15116 133 aaKnown RBP16.92■□□□□ 0.3
CLK2-202ENST00000361168 CHST10O43529 356 aa16.92■□□□□ 0.3
CLK2-202ENST00000361168 PEX11AO75192 247 aa16.92■□□□□ 0.3
CLK2-202ENST00000361168 WT1P19544 449 aaPredicted RBP16.92■□□□□ 0.3
CLK2-202ENST00000361168 TPP2P29144 1249 aaPredicted RBP16.92■□□□□ 0.3
CLK2-202ENST00000361168 STAT5AP42229 794 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms