RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 TRPC4Q9UBN4 977 aa23■■□□□ 1.27
ALKAL1-201ENST00000358543 MRPS18BQ9Y676 258 aaKnown RBP23■■□□□ 1.27
ALKAL1-201ENST00000358543 PTPRQQ9UMZ3 2332 aa22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 SERTM1A2A2V5 107 aa22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 WDR91A4D1P6 747 aa22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 K7ENP7 123 aa22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 ULK1O75385 1050 aa22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 PDYNP01213 254 aa22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 HSD3B1P14060 373 aa22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 IL10P22301 178 aa22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 HSD3B2P26439 372 aa22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 PLA2G16P53816 162 aa22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 BTN3A2P78410 334 aa22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 INO80CQ6PI98 192 aaPredicted RBP22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 ZCCHC23Q6ZST2 131 aa22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 CUZD1Q86UP6 607 aa22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 STT3BQ8TCJ2 826 aa22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 SNRNP27Q8WVK2 155 aaKnown RBP22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 RGMAQ96B86 450 aa22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 SPSB2Q99619 263 aa22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 C14orf105Q9NVL8 296 aa22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 CTSFQ9UBX1 484 aa22.99■■□□□ 1.27
ALKAL1-201ENST00000358543 ZNF891A8MT65 544 aaPredicted RBP22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 ATP8B1O43520 1251 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 RDH16O75452 317 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 SEMA3DO95025 777 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 SCELO95171 688 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 B3GALT4O96024 378 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 SERPINE1P05121 402 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 FGF4P08620 206 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 ZGLP1P0C6A0 271 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 UROSP10746 265 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 GRK2P25098 689 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 MTTPP55157 894 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 MAT1AQ00266 395 aaKnown RBP22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 ARL13AQ5H913 290 aaPredicted RBP22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 PPP1R14CQ8TAE6 165 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 MIEF2Q96C03 454 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 KCNA7Q96RP8 456 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 SERINC2Q96SA4 455 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 YIPF2Q9BWQ6 316 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 MLXIPLQ9NP71 852 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 FARSBQ9NSD9 589 aaKnown RBP22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 NMRK1Q9NWW6 199 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 PTRH2Q9Y3E5 179 aaKnown RBP22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 TIMM22Q9Y584 194 aa22.98■■□□□ 1.27
ALKAL1-201ENST00000358543 B3GALT2O43825 422 aa22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 CRCPO75575 148 aa22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 SNUPNO95149 360 aaKnown RBP22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 ETHE1O95571 254 aa22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 FOLR3P41439 243 aa22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 FOXA1P55317 472 aa22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 RPS18P62269 152 aaKnown RBP22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 VAC14Q08AM6 782 aa22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 CSTF3Q12996 717 aaKnown RBP22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 SSPNQ14714 243 aa22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 CHI3L2Q15782 390 aa22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 SYT16Q17RD7 645 aa22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 AP5B1Q2VPB7 878 aa22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 SGO1Q5FBB7 561 aa22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 VWA2Q5GFL6 755 aa22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 OR4C11Q6IEV9 310 aa22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 MED25Q71SY5 747 aa22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 GBP7Q8N8V2 638 aaPredicted RBP22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 OR5T3Q8NGG3 340 aa22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 NACC2Q96BF6 587 aa22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 PAIP2Q9BPZ3 127 aaKnown RBP22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 HCN3Q9P1Z3 774 aa22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 CCDC88CQ9P219 2028 aa22.97■■□□□ 1.27
ALKAL1-201ENST00000358543 ZNF860A6NHJ4 632 aa22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 TMEM114B3SHH9 223 aa22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 AZIN1O14977 448 aa22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 CHST10O43529 356 aa22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 SH3BGRLO75368 114 aa22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 BMP10O95393 424 aa22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 CHRNGP07510 517 aa22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 ATXN8OSP0DMR3 200 aa22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 ATP5A1P25705 553 aaKnown RBP22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 RAP1GDS1P52306 607 aa22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 UGT8Q16880 541 aa22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 TCHHL1Q5QJ38 904 aaPredicted RBP22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 ZC3H7AQ8IWR0 971 aaKnown RBP22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 OR1F2PQ96R84 312 aa22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 SHCBP1LQ9BZQ2 653 aa22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 COPS7BQ9H9Q2 264 aaPredicted RBP22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 CPNE5Q9HCH3 593 aa22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 TNFRSF12AQ9NP84 129 aa22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 AHSPQ9NZD4 102 aa22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 USP24Q9UPU5 2620 aa22.96■■□□□ 1.27
ALKAL1-201ENST00000358543 A0A0G2JN53 185 aa22.95■■□□□ 1.26
ALKAL1-201ENST00000358543 PLPP1O14494 284 aa22.95■■□□□ 1.26
ALKAL1-201ENST00000358543 NKX2-8O15522 239 aa22.95■■□□□ 1.26
ALKAL1-201ENST00000358543 DNAJB6O75190 326 aa22.95■■□□□ 1.26
ALKAL1-201ENST00000358543 UMODP07911 640 aa22.95■■□□□ 1.26
ALKAL1-201ENST00000358543 HIST1H1TP22492 207 aaPredicted RBP22.95■■□□□ 1.26
ALKAL1-201ENST00000358543 ARRB2P32121 409 aa22.95■■□□□ 1.26
ALKAL1-201ENST00000358543 XCR1P46094 333 aa22.95■■□□□ 1.26
ALKAL1-201ENST00000358543 RUNX2Q13950 521 aa22.95■■□□□ 1.26
ALKAL1-201ENST00000358543 ABRAXAS2Q15018 415 aa22.95■■□□□ 1.26
ALKAL1-201ENST00000358543 RNF165Q6ZSG1 346 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms