RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 TRAF6Q9Y4K3 522 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 ELOVL7A1L3X0 281 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 EEF1E1-BLOC1S5C9J1V9 151 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 EEF1E1O43324 174 aaKnown RBP9.45□□□□□ -0.9
CHD3-202ENST00000358181 FAM155BO75949 473 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 GOT2P00505 430 aaKnown RBP9.45□□□□□ -0.9
CHD3-202ENST00000358181 CCL5P13501 91 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 ITGB5P18084 799 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 MRPS5P82675 430 aaKnown RBP9.45□□□□□ -0.9
CHD3-202ENST00000358181 CDK3Q00526 305 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 SLBPQ14493 270 aaKnown RBP eCLIP9.45□□□□□ -0.9
CHD3-202ENST00000358181 PDK4Q16654 411 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 C15orf52Q6ZUT6 534 aaKnown RBP9.45□□□□□ -0.9
CHD3-202ENST00000358181 TOMM5Q8N4H5 51 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 TSEN2Q8NCE0 465 aaKnown RBP9.45□□□□□ -0.9
CHD3-202ENST00000358181 DIO2Q92813 273 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 OR14J1Q9UGF5 321 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 CENPBD1B2RD01 187 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 IMPA2O14732 288 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 STK16O75716 305 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 TEAD2Q15562 447 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 TMEM71Q6P5X7 295 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 SPATA19Q7Z5L4 167 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 MRPL41Q8IXM3 137 aaKnown RBP9.45□□□□□ -0.9
CHD3-202ENST00000358181 GJD3Q8N144 294 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 CLEC1AQ8NC01 280 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 SEC14L1Q92503 715 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 RBP7Q96R05 134 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 GPR20Q99678 358 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 SLC35A5Q9BS91 424 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 SEMA6CQ9H3T2 930 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 ZBTB20Q9HC78 741 aaPredicted RBP9.45□□□□□ -0.9
CHD3-202ENST00000358181 A0A1B0GVM2 712 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 TCAF2A6NFQ2 919 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 PCDH7O60245 1069 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 OPN1SWP03999 348 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 DEFA4P12838 97 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 PEPDP12955 493 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 MAGEA8P43361 318 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 TAS2R40P59535 323 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 ATP6V0D1P61421 351 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 MPP1Q00013 466 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 ZNF616Q08AN1 781 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 GPR153Q6NV75 609 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 TPRG1Q6ZUI0 275 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 ZNF761Q86XN6 746 aaPredicted RBP9.44□□□□□ -0.9
CHD3-202ENST00000358181 BBS10Q8TAM1 723 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 RGMAQ96B86 450 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 PYCR2Q96C36 320 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 AP1G1O43747 822 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 CBX7O95931 251 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 CCL14Q16627 93 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 ZNF674Q2M3X9 581 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 KIAA1614Q5VZ46 1190 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 TRIM46Q7Z4K8 759 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 DCP2Q8IU60 420 aaKnown RBP9.44□□□□□ -0.9
CHD3-202ENST00000358181 TCF12Q99081 682 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 SULT4A1Q9BR01 284 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 CNTN3Q9P232 1028 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 PCDHB1Q9Y5F3 818 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 E7ESA3 106 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 IFNA1P01562 189 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 ELOCQ15369 112 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 ABHD17BQ5VST6 288 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 PRICKLE2Q7Z3G6 844 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 SUN5Q8TC36 379 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 TCTEX1D2Q8WW35 142 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 NANOS1Q8WY41 292 aaKnown RBP9.44□□□□□ -0.9
CHD3-202ENST00000358181 SLC22A18Q96BI1 424 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 BTN2A3PQ96KV6 586 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 C7orf50Q9BRJ6 194 aaKnown RBP9.44□□□□□ -0.9
CHD3-202ENST00000358181 PRDM12Q9H4Q4 367 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 SLC2A4RGQ9NR83 387 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 PPM1HQ9ULR3 514 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 WNT6Q9Y6F9 365 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 TRAV6A0A075B6T7 132 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 RCCD1A6NED2 376 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 SOX30O94993 753 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 OPN1LWP04000 364 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 SRPRAP08240 638 aaKnown RBP9.44□□□□□ -0.9
CHD3-202ENST00000358181 DPP4P27487 766 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 RORCP51449 518 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 HSD11B2P80365 405 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 TLE3Q04726 772 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 GALNT1Q10472 559 aaPredicted RBP9.44□□□□□ -0.9
CHD3-202ENST00000358181 SF3A2Q15428 464 aaKnown RBP9.44□□□□□ -0.9
CHD3-202ENST00000358181 TAF1AQ15573 450 aaPredicted RBP9.44□□□□□ -0.9
CHD3-202ENST00000358181 REP15Q6BDI9 236 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 TMEM110Q86TL2 294 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 JOSD2Q8TAC2 188 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 TSACCQ96A04 125 aaPredicted RBP9.44□□□□□ -0.9
CHD3-202ENST00000358181 COG8Q96MW5 612 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 OBP2BQ9NPH6 170 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 MRPL15Q9P015 296 aaKnown RBP9.44□□□□□ -0.9
CHD3-202ENST00000358181 LRIT1Q9P2V4 623 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 CLDN25C9JDP6 229 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 PPP1R11O60927 126 aaPredicted RBP9.44□□□□□ -0.9
CHD3-202ENST00000358181 USP2O75604 605 aaPredicted RBP9.44□□□□□ -0.9
CHD3-202ENST00000358181 IFNA7P01567 189 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 MATN1P21941 496 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms