RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 WDR88Q6ZMY6 472 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 Q6ZNX1 250 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 CEP68Q76N32 757 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 BMP8AQ7Z5Y6 402 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 BEST3Q8N1M1 668 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 C12orf45Q8N5I9 185 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-202ENST00000357162 GPER1Q99527 375 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 PKP2Q99959 881 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 CIPCQ9C0C6 399 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 IDSP22304 550 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 CMPK1P30085 196 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 GPR1P46091 355 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 RAB8AP61006 207 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 HMBOX1Q6NT76 420 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 RHBDF2Q6PJF5 856 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 MSANTD3Q96H12 275 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 TTYH2Q9BSA4 534 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 ELL3Q9HB65 397 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-202ENST00000357162 H7C417 338 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 M0R2N6 131 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 USP12O75317 370 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 GJA1P17302 382 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 HOXB9P17482 250 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-202ENST00000357162 ITGB5P18084 799 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 CHIT1Q13231 466 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 DCAF12L1Q5VU92 463 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 ACBD7Q8N6N7 88 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 ZNF675Q8TD23 568 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 TSSK3Q96PN8 268 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 TMEM39BQ9GZU3 492 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 ARL6Q9H0F7 186 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 SLC38A1Q9H2H9 487 aa6.36□□□□□ -1.39
VPS13B-202ENST00000357162 GMPR2Q9P2T1 348 aaKnown RBP6.36□□□□□ -1.39
VPS13B-202ENST00000357162 ATAD5Q96QE3 1844 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 TMEM63AO94886 807 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 FSHRP23945 695 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 RGS6P49758 472 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 DSTNP60981 165 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 NDUFAF5Q5TEU4 345 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 OR2T35Q8NGX2 323 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 OR2T11Q8NH01 316 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 COPS5Q92905 334 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 L3HYPDHQ96EM0 354 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 SPON1Q9HCB6 807 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 CNTNAP1P78357 1384 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 RPS2P15880 293 aaKnown RBP6.35□□□□□ -1.39
VPS13B-202ENST00000357162 JUNBP17275 347 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-202ENST00000357162 SERINC3Q13530 473 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 CARTPTQ16568 116 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ARSKQ6UWY0 536 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 CHRDL2Q6WN34 429 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 VASH1Q7L8A9 365 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-202ENST00000357162 SLC43A3Q8NBI5 491 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 XAGE5Q8WWM1 108 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 SMPDL3AQ92484 453 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 BRD7Q9NPI1 651 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 RBFOX1Q9NWB1 397 aaKnown RBP6.35□□□□□ -1.39
VPS13B-202ENST00000357162 TMPRSS11EQ9UL52 423 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 RAI2Q9Y5P3 530 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 SPTBN4Q9H254 2564 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 SHOXO15266 292 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 GRIN3BO60391 1043 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 RBMXP38159 391 aaKnown RBP6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ART1P52961 327 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 VAMP2P63027 116 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 RING1Q06587 406 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 FOXD4Q12950 439 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-202ENST00000357162 NPY5RQ15761 445 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ENPP7Q6UWV6 458 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ABHD15Q6UXT9 468 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ABHD13Q7L211 337 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 CEP97Q8IW35 865 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ACBD4Q8NC06 268 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 DNASE1L2Q92874 299 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ARNTLO00327 626 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 IMPA2O14732 288 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 B3GALT2O43825 422 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 CDK4P11802 303 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ECI1P42126 302 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 GPR50Q13585 617 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 PPP1R3AQ16821 1122 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 C16orf59Q7L2K0 433 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 OR6Q1Q8NGQ2 317 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 C1orf74Q96LT6 269 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 RNF32Q9H0A6 362 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 GORASP2Q9H8Y8 452 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 AGAP14A8MT82 685 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ARF4P18085 180 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-202ENST00000357162 SFT2D3Q587I9 215 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 PCDHB9Q9Y5E1 797 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 C5orf51A6NDU8 294 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 CERS1P27544 350 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 CDK6Q00534 326 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 PCLAFQ15004 111 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 PTPRRQ15256 657 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 PRAMEF13Q5VWM6 474 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 PGBD2Q6P3X8 592 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 GPAT4Q86UL3 456 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 OR2L2Q8NH16 312 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ASB12Q8WXK4 309 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms