RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 RPS21P63220 83 aaKnown RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 S100A12P80511 92 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 HMGCS1Q01581 520 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 GALNT2Q10471 571 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 PMS2P3Q13401 168 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 CLCA4Q14CN2 919 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 ITPRIPL2Q3MIP1 535 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 PRRT3Q5FWE3 981 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 LRRC73Q5JTD7 316 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 SLC15A3Q8IY34 581 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 CMASQ8NFW8 434 aaPredicted RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 SETD7Q8WTS6 366 aaKnown RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 CYB5D2Q8WUJ1 264 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 PEX13Q92968 403 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 ZUFSPQ96AP4 578 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 LRCH3Q96II8 777 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 KLHL15Q96M94 604 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 DMRTB1Q96MA1 342 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 BCO2Q9BYV7 579 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 REEP4Q9H6H4 257 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 BRF2Q9HAW0 419 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 UGT1A7Q9HAW7 530 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 UGT1A10Q9HAW8 530 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 UGT1A8Q9HAW9 530 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 SUSD2Q9UGT4 822 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 ZFR2Q9UPR6 939 aaKnown RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 SH2B3Q9UQQ2 575 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 WDR45Q9Y484 360 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 ARHGEF28Q8N1W1 1705 aaKnown RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 RIMBP3CA6NJZ7 1639 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 RIMBP3BA6NNM3 1639 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 RIMBP3Q9UFD9 1639 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 A0A0G2JN53 185 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 ISPDA4D126 451 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 OR6C70A6NIJ9 312 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 LOC730098B7Z3J9 87 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 H7C417 338 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 NPC1O15118 1278 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 MMP20O60882 483 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 IFNA5P01569 189 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 ACRP10323 421 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 IRF2P14316 349 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 FOSL2P15408 326 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 ZNF16P17020 682 aaPredicted RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 CTBP2P56545 445 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 RPS13P62277 151 aaKnown RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 PHC1P78364 1004 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 PITRM1Q5JRX3 1037 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 EPGNQ6UW88 154 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 TMPPEQ6ZT21 453 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 Q6ZVU0 165 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 ERMP1Q7Z2K6 904 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 LNX2Q8N448 690 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 KCNJ9Q92806 393 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 ESAMQ96AP7 390 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 SLC30A2Q9BRI3 323 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 TTYH2Q9BSA4 534 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 URM1Q9BTM9 101 aaKnown RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.25□□□□□ -1.41
UPF2-201ENST00000356352 MVB12BQ9H7P6 319 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 INSL5Q9Y5Q6 135 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 MAGED1Q9Y5V3 778 aaPredicted RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 IGKV6D-41A0A0C4DH26 115 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 BLOC1S5-TXNDC5H3BN57 136 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 PROM1O43490 865 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 B4GALT2O60909 372 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 INMTO95050 263 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 CDRT1O95170 752 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 HPRP00739 348 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 PRLP01236 227 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 SOD2P04179 222 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 GALTP07902 379 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 FHP07954 510 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 TYRP14679 529 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 NPR2P20594 1047 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 FBLP22087 321 aaKnown RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 LHCGRP22888 699 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 CCNHP51946 323 aaPredicted RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 GPR17Q13304 367 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 SF3B4Q15427 424 aaKnown RBP eCLIP6.25□□□□□ -1.411e-6■■■□□ 19.1
UPF2-201ENST00000356352 CNPY1Q3B7I2 92 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 ZNF792Q3KQV3 632 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 CYBRD1Q53TN4 286 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 BEND4Q6ZU67 534 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 ALDH16A1Q8IZ83 802 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 TRAM1L1Q8N609 369 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 SLC37A3Q8NCC5 494 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 ZNF431Q8TF32 576 aaPredicted RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 CLEC4CQ8WTT0 213 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 SEC14L1Q92503 715 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 NSMAFQ92636 917 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 ARMC5Q96C12 935 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 CCDC120Q96HB5 630 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 C1orf74Q96LT6 269 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 IL4I1Q96RQ9 567 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 C17orf62Q9BQA9 187 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 FN3KQ9H479 309 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 OAZ3Q9UMX2 235 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 LIPT1Q9Y234 373 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms