RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 MSRB3Q8IXL7 192 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 NUDT8Q8WV74 236 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 GAL3ST1Q99999 423 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 TREX2Q9BQ50 279 aaPredicted RBP15.13■□□□□ 0.01
RTN3-205ENST00000356000 DNTTIP1Q9H147 329 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 OR51M1Q9H341 326 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 SYNDIG1Q9H7V2 258 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 DLL4Q9NR61 685 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 SLC2A6Q9UGQ3 507 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 TSPAN16Q9UKR8 245 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 FZD10Q9ULW2 581 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 SLC6A5Q9Y345 797 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 ZNF451Q9Y4E5 1061 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 MEIKINA0A087WXM9 373 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 HOXC6P09630 235 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 SURF1Q15526 300 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 SHFQ7M4L6 423 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 CALHM3Q86XJ0 350 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 STX12Q86Y82 276 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 C1orf52Q8N6N3 182 aaKnown RBP15.13■□□□□ 0.01
RTN3-205ENST00000356000 RNF139Q8WU17 664 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 RAD51AP1Q96B01 352 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 LRRC46Q96FV0 321 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 C12orf42Q96LP6 360 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 ZIC5Q96T25 663 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 SLC38A3Q99624 504 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 CCM2Q9BSQ5 444 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 PTDSS2Q9BVG9 487 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 OR51J1Q9H342 316 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 C1orf109Q9NX04 203 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 UBP1Q9NZI7 540 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 SCP2D1Q9UJQ7 156 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 SSR3Q9UNL2 185 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 EFCAB7A8K855 629 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 DIRAS1O95057 198 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 MTHFD2P13995 350 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 SDC2P34741 201 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 SOX3P41225 446 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 INPP1P49441 399 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 PPP3R1P63098 170 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 DMC1Q14565 340 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 KIAA0040Q15053 153 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 FKBP1CQ5VVH2 108 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 PYHIN1Q6K0P9 492 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 ZNF549Q6P9A3 640 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 CNIH2Q6PI25 160 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 SCIMPQ6UWF3 145 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 ZER1Q7Z7L7 766 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 POF1BQ8WVV4 589 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 MRPS24Q96EL2 167 aaKnown RBP15.13■□□□□ 0.01
RTN3-205ENST00000356000 SFXN2Q96NB2 322 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 SARGQ9BW04 601 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 DEFB129Q9H1M3 183 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 KCNH6Q9H252 994 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 GAREM1Q9H706 876 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 MS4A12Q9NXJ0 267 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 SLC25A37Q9NYZ2 338 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 CNOT2Q9NZN8 540 aaKnown RBP15.13■□□□□ 0.01
RTN3-205ENST00000356000 A0A0G2JPF8 293 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 LCHNA4D1U4 455 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 HNRNPCL3B7ZW38 293 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 ARVCFO00192 962 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 AP2A2O94973 939 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 HNRNPCL4P0DMR1 293 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 RHCEP18577 417 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 PTAFRP25105 342 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 S100PP25815 95 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 STARP49675 285 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 EPHA4P54764 986 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 EMC2Q15006 297 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 TEAD4Q15561 434 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 PAN3Q58A45 887 aaKnown RBP15.12■□□□□ 0.01
RTN3-205ENST00000356000 SPOUT1Q5T280 376 aaKnown RBP15.12■□□□□ 0.01
RTN3-205ENST00000356000 ATG9BQ674R7 924 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 ZNF425Q6IV72 752 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 ADGRG2Q8IZP9 1017 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 TRMT2BQ96GJ1 504 aaKnown RBP15.12■□□□□ 0.01
RTN3-205ENST00000356000 OR2M2Q96R28 347 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 THUMPD1Q9NXG2 353 aaKnown RBP15.12■□□□□ 0.01
RTN3-205ENST00000356000 SLC6A14Q9UN76 642 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 SAMD4AQ9UPU9 718 aaKnown RBP15.12■□□□□ 0.01
RTN3-205ENST00000356000 COL2A1P02458 1487 aaPredicted RBP15.12■□□□□ 0.01
RTN3-205ENST00000356000 GOLGB1Q14789 3259 aaKnown RBP15.12■□□□□ 0.01
RTN3-205ENST00000356000 WDR81Q562E7 1941 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 MLYCDO95822 493 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 GLUD1P00367 558 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 IGHV2-70P01814 119 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 RLN2P04090 185 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 SYN1P17600 705 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 C4BPBP20851 252 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 PBX3P40426 434 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 KCNJ5P48544 419 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 GZMMP51124 257 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 VASNQ6EMK4 673 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 KIAA0930Q6ICG6 404 aaPredicted RBP15.12■□□□□ 0.01
RTN3-205ENST00000356000 ZNF296Q8WUU4 475 aaPredicted RBP15.12■□□□□ 0.01
RTN3-205ENST00000356000 EDARADDQ8WWZ3 215 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 SCRN2Q96FV2 425 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 TOX2Q96NM4 488 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 FAM126AQ9BYI3 521 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms