RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 TUBA3CQ13748 450 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 ACER2Q5QJU3 275 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 ABHD17BQ5VST6 288 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 SULT1C3Q6IMI6 304 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 TUBA3EQ6PEY2 450 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 ZNF793Q6ZN11 406 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 QSOX2Q6ZRP7 698 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 ZNF227Q86WZ6 799 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 MDS2Q8NDY4 140 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 M1APQ8TC57 530 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 ELP5Q8TE02 316 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 CCT6BQ92526 530 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 RNF32Q9H0A6 362 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 MMP25Q9NPA2 562 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 STMN3Q9NZ72 180 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 ZNF223Q9UK11 482 aaPredicted RBP15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 RNF112Q9ULX5 631 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 MYO7BQ6PIF6 2116 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 TRAV17A0A0B4J275 112 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 RTCAO00442 366 aaKnown RBP15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 C2P06681 752 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 RNH1P13489 461 aaKnown RBP15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 ICAM2P13598 275 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 STX2P32856 288 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 CD96P40200 585 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 PLA2G16P53816 162 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 E2F2Q14209 437 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 PDK4Q16654 411 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 XKR6Q5GH73 641 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 MROH9Q5TGP6 573 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 SCUBE1Q8IWY4 988 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 PLD6Q8N2A8 252 aaKnown RBP15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 TBC1D19Q8N5T2 526 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 FAM47BQ8NA70 645 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 GAL3ST3Q96A11 431 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 GPR78Q96P69 363 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 F2RL3Q96RI0 385 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 LPAR4Q99677 370 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 CD244Q9BZW8 370 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 NT5DC2Q9H857 520 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 SNX15Q9NRS6 342 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 AGPAT4Q9NRZ5 378 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 ZNF358Q9NW07 568 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 GPRC5BQ9NZH0 403 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 OSGIN2Q9Y236 505 aa15.67■□□□□ 0.1
PDLIM7-201ENST00000355572 SUPT3HB4E1H0 165 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 ZNHIT1O43257 154 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 PRKNO60260 465 aaPredicted RBP15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 PRMT3O60678 531 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 PRAMEF2O60811 474 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 SUPT3HO75486 399 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 CLEC3AO75596 197 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 ALDOAP04075 364 aaKnown RBP15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 UQCRHP07919 91 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 LTA4HP09960 611 aaKnown RBP15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 EDN3P14138 238 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 IL10P22301 178 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 ACTN3Q08043 901 aaPredicted RBP15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 CHIT1Q13231 466 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 EXT1Q16394 746 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 CDKL4Q5MAI5 379 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 SPINK14Q6IE38 97 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 ABHD17CQ6PCB6 329 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 FAM180AQ6UWF9 173 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 RAPH1Q70E73 1250 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 CYP4X1Q8N118 509 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 MMGT1Q8N4V1 131 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 UBTD2Q8WUN7 234 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 NR4A3Q92570 626 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 SORBS1Q9BX66 1292 aaKnown RBP15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 CDC42EP4Q9H3Q1 356 aaKnown RBP15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 CDCP1Q9H5V8 836 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 PRDM7Q9NQW5 492 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 OLAHQ9NV23 265 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 NUDT4Q9NZJ9 180 aa15.66■□□□□ 0.1
PDLIM7-201ENST00000355572 SAGE2PA6NJ88 616 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 GABRR3A8MPY1 467 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 CYR61O00622 381 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 CLGNO14967 610 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 KERAO60938 352 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 H2AFYO75367 372 aaKnown RBP15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 NEURL1O76050 574 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 JAK1P23458 1154 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 RAB38P57729 211 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 CKAP4Q07065 602 aaKnown RBP15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 ZNF766Q5HY98 468 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 C16orf47Q6ZP98 133 aaPredicted RBP15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 CLNKQ7Z7G1 428 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 TCAIMQ8N3R3 496 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 APCDD1LQ8NCL9 501 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 OR2L5Q8NG80 312 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 ZNF473Q8WTR7 871 aaKnown RBP15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 SREK1Q8WXA9 508 aaKnown RBP15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 ZNF592Q92610 1267 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 PTCD3Q96EY7 689 aaKnown RBP15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 ZNF354BQ96LW1 612 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 MS4A8Q9BY19 250 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 EHD1Q9H4M9 534 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 PRDM9Q9NQV7 894 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms