RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 LKAAEAR1Q8TD35 194 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 RASSF5Q8WWW0 418 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 TESCQ96BS2 214 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 GFM1Q96RP9 751 aaKnown RBP9.71□□□□□ -0.85
SYNE1-203ENST00000354674 C1QTNF2Q9BXJ5 285 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 ELOVL6Q9H5J4 265 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 EPHX3Q9H6B9 360 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 SLC23A1Q9UHI7 598 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 CA14Q9ULX7 337 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 IGLON5A6NGN9 336 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 IQCF5A8MTL0 148 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 IGLV3-19P01714 112 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 GABRG2P18507 467 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 GGT5P36269 586 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 TRAF3Q13114 568 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 LRRC32Q14392 662 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 IRF3Q14653 427 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 KIF19Q2TAC6 998 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 ZMAT1Q5H9K5 638 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 RABL3Q5HYI8 236 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 TPRG1LQ5T0D9 272 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 PTRHD1Q6GMV3 140 aaKnown RBP9.71□□□□□ -0.86
SYNE1-203ENST00000354674 KIAA1161Q6NSJ0 714 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 ADAMTSL4Q6UY14 1074 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 SYT13Q7L8C5 426 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 VPS37AQ8NEZ2 397 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 OR4M2Q8NGB6 313 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 OR8K3Q8NH51 312 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 RHEBL1Q8TAI7 183 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 TRMT61AQ96FX7 289 aaKnown RBP9.71□□□□□ -0.86
SYNE1-203ENST00000354674 COX14Q96I36 57 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 DCSTAMPQ9H295 470 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 OXSMQ9NWU1 459 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 MBD1Q9UIS9 605 aaPredicted RBP9.71□□□□□ -0.86
SYNE1-203ENST00000354674 MID2Q9UJV3 735 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 NDRG2Q9UN36 371 aaKnown RBP9.71□□□□□ -0.86
SYNE1-203ENST00000354674 TRIM64BA6NI03 449 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 CCDC154A6NI56 674 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 ZNF99A8MXY4 864 aaPredicted RBP9.71□□□□□ -0.86
SYNE1-203ENST00000354674 K7ESM1 405 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 ARHGEF9O43307 516 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 LZTS3O60299 673 aaPredicted RBP9.71□□□□□ -0.86
SYNE1-203ENST00000354674 TRIM13O60858 407 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 CAPNS1P04632 268 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 LCKP06239 509 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 YES1P07947 543 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 CENPAP49450 140 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 ERVK-8P63133 956 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 ZNF33BQ06732 778 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 FAM209BQ5JX69 171 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 ARMC4Q5T2S8 1044 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 Q6ZS52 159 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 PTERQ96BW5 349 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 CENPNQ96H22 339 aaPredicted RBP9.71□□□□□ -0.86
SYNE1-203ENST00000354674 SHDQ96IW2 340 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 MAGEB10Q96LZ2 347 aaPredicted RBP9.71□□□□□ -0.86
SYNE1-203ENST00000354674 TMEM74Q96NL1 305 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 TRNT1Q96Q11 434 aaKnown RBP9.71□□□□□ -0.86
SYNE1-203ENST00000354674 BCL7BQ9BQE9 202 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 TFB2MQ9H5Q4 396 aaKnown RBP9.71□□□□□ -0.86
SYNE1-203ENST00000354674 RERGLQ9H628 205 aa9.71□□□□□ -0.86
SYNE1-203ENST00000354674 USP36Q9P275 1121 aaKnown RBP9.71□□□□□ -0.86
SYNE1-203ENST00000354674 TRMT6Q9UJA5 497 aaKnown RBP9.71□□□□□ -0.86
SYNE1-203ENST00000354674 MRPS17Q9Y2R5 130 aaKnown RBP9.71□□□□□ -0.86
SYNE1-203ENST00000354674 A0A0C4DFX4 3053 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 RAB19A4D1S5 217 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 SDHBP21912 280 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 RPS21P63220 83 aaKnown RBP9.7□□□□□ -0.86
SYNE1-203ENST00000354674 CD47Q08722 323 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 FGL2Q14314 439 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 ZNF658BQ4V348 819 aaPredicted RBP9.7□□□□□ -0.86
SYNE1-203ENST00000354674 PNCKQ6P2M8 343 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 TMEM65Q6PI78 240 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 ZNF600Q6ZNG1 722 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 CACUL1Q86Y37 369 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 UBALD2Q8IYN6 164 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 MFSD2AQ8NA29 543 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 LSM14AQ8ND56 463 aaKnown RBP9.7□□□□□ -0.86
SYNE1-203ENST00000354674 MCOLN3Q8TDD5 553 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 SLC5A11Q8WWX8 675 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 Q96MT0 163 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 SLIRPQ9GZT3 109 aaKnown RBP9.7□□□□□ -0.86
SYNE1-203ENST00000354674 SLA2Q9H6Q3 261 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 LMAN1LQ9HAT1 526 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 AGPAT4Q9NRZ5 378 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 XPR1Q9UBH6 696 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 SUCOQ9UBS9 1254 aaKnown RBP9.7□□□□□ -0.86
SYNE1-203ENST00000354674 PTGDR2Q9Y5Y4 395 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 F5P12259 2224 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 TCRBV21S2A2A0A5A6 115 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 MEIOCA2RUB1 952 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 NME4O00746 187 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 SIGLEC5O15389 551 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 SLC25A14O95258 325 aaPredicted RBP9.7□□□□□ -0.86
SYNE1-203ENST00000354674 OR56A5P0C7T3 313 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 IL7P13232 177 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 KELP23276 732 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 DGKEP52429 567 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 POLR2GP62487 172 aaKnown RBP eCLIP9.7□□□□□ -0.86
SYNE1-203ENST00000354674 SIGLEC14Q08ET2 396 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms