RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 PRDX1Q06830 199 aaKnown RBP19.45■□□□□ 0.7
CHRNA3-202ENST00000348639 RBBP4Q09028 425 aa19.45■□□□□ 0.7
CHRNA3-202ENST00000348639 FADDQ13158 208 aa19.45■□□□□ 0.7
CHRNA3-202ENST00000348639 KCNAB2Q13303 367 aa19.45■□□□□ 0.7
CHRNA3-202ENST00000348639 ZC3H12BQ5HYM0 836 aaKnown RBP19.45■□□□□ 0.7
CHRNA3-202ENST00000348639 QRFPRQ96P65 431 aa19.45■□□□□ 0.7
CHRNA3-202ENST00000348639 ING2Q9H160 280 aa19.45■□□□□ 0.7
CHRNA3-202ENST00000348639 ZNF576Q9H609 170 aa19.45■□□□□ 0.7
CHRNA3-202ENST00000348639 PLEKHM1Q9Y4G2 1056 aa19.45■□□□□ 0.7
CHRNA3-202ENST00000348639 GPSM3Q9Y4H4 160 aa19.45■□□□□ 0.7
CHRNA3-202ENST00000348639 PIAS3Q9Y6X2 628 aa19.45■□□□□ 0.7
CHRNA3-202ENST00000348639 ANHXE9PGG2 379 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 hCG_2039718K7EN88 272 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 CACNB4O00305 520 aaPredicted RBP19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 CAPN5O15484 640 aaPredicted RBP19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 SUV39H1O43463 412 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 ETFAP13804 333 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 DDCP20711 480 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 PKLRP30613 574 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 DNAJA1P31689 397 aaKnown RBP19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 PIGAP37287 484 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 RAD23AP54725 363 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 CSNK1G2P78368 415 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 B3GNT6Q6ZMB0 384 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 MMP21Q8N119 569 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 OR2L8Q8NGY9 312 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 TM4SF18Q96CE8 201 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 SIPA1Q96FS4 1042 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 SCARF2Q96GP6 870 aaPredicted RBP19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 MSLNLQ96KJ4 702 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 MVB12BQ9H7P6 319 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 SLC24A3Q9HC58 644 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 ORC6Q9Y5N6 252 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 TNRC18O15417 2968 aaPredicted RBP19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 RTCAO00442 366 aaKnown RBP19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 DPM1O60762 260 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 TBX19O60806 448 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 GCM2O75603 506 aaPredicted RBP19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 HLCSP50747 726 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 PPP2CBP62714 309 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 PPP2CAP67775 309 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 UAP1L1Q3KQV9 507 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 GCNT6Q5T4J0 391 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 TRIM40Q6P9F5 258 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 ALDH16A1Q8IZ83 802 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 ADGRF3Q8IZF5 1079 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 SMRP1Q8NCR6 262 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 OR2A1Q8NGT9 310 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 ASB12Q8WXK4 309 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 TPD52L3Q96J77 140 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 RAD21L1Q9H4I0 556 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 XKR8Q9H6D3 395 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 TMEM38AQ9H6F2 299 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 VCX3AQ9NNX9 186 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 C1GALT1Q9NS00 363 aa19.44■□□□□ 0.7
CHRNA3-202ENST00000348639 PRUNE2Q8WUY3 3088 aa19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 OR1F1O43749 312 aa19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 FPR1P21462 350 aa19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 ELK4P28324 431 aa19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 CHI3L1P36222 383 aaPredicted RBP19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 ITGA1P56199 1179 aa19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 ESRRGP62508 458 aa19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 KCNJ10P78508 379 aa19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 ROR2Q01974 943 aaKnown RBP19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 LSAMPQ13449 338 aa19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 KRT33BQ14525 404 aa19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 IQCCQ4KMZ1 466 aa19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 CEP68Q76N32 757 aa19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 TDHQ8IZJ6 230 aa19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 NATD1Q8N6N6 113 aa19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 RGMAQ96B86 450 aa19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 NRBF2Q96F24 287 aa19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 C7orf34Q96L11 122 aa19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 DOHHQ9BU89 302 aa19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 DDX18Q9NVP1 670 aaKnown RBP19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 BRWD1Q9NSI6 2320 aa19.43■□□□□ 0.7
CHRNA3-202ENST00000348639 IGKV1-8A0A0C4DH67 115 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 LOC100130705A0A1B0GUX0 176 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 PDZK1P1A8MUH7 402 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 MYO1GB0I1T2 1018 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 TMEM229AB2RXF0 380 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 SLC16A6O15403 523 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 KRT75O95678 551 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 AQP1P29972 269 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 GRSF1Q12849 480 aaKnown RBP eCLIP19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 ELOAQ14241 798 aaKnown RBP19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 HEPACAMQ14CZ8 416 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 SLC5A12Q1EHB4 618 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 LHX9Q9NQ69 397 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 ADAM29Q9UKF5 820 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 ACSL6Q9UKU0 697 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 PCDHGA8Q9Y5G5 932 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 OR52A4PA6NMU1 304 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 NDUFS4O43181 175 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 LCMT2O60294 686 aaKnown RBP19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 DIRAS1O95057 198 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 ACADMP11310 421 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 GSTM5P46439 218 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 PRIM2P49643 509 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms