RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 SSR2P43308 183 aa18.03■□□□□ 0.48
CHMP4A-201ENST00000347519 MC2RQ01718 297 aa18.03■□□□□ 0.48
CHMP4A-201ENST00000347519 GRM7Q14831 915 aa18.03■□□□□ 0.48
CHMP4A-201ENST00000347519 METTL21CQ5VZV1 264 aa18.03■□□□□ 0.48
CHMP4A-201ENST00000347519 ACOT4Q8N9L9 421 aa18.03■□□□□ 0.48
CHMP4A-201ENST00000347519 OR9A4Q8NGU2 314 aa18.03■□□□□ 0.48
CHMP4A-201ENST00000347519 KCNC2Q96PR1 638 aa18.03■□□□□ 0.48
CHMP4A-201ENST00000347519 DEPDC7Q96QD5 511 aa18.03■□□□□ 0.48
CHMP4A-201ENST00000347519 CENPKQ9BS16 269 aa18.03■□□□□ 0.48
CHMP4A-201ENST00000347519 TBCDQ9BTW9 1192 aa18.03■□□□□ 0.48
CHMP4A-201ENST00000347519 MYLK2Q9H1R3 596 aa18.03■□□□□ 0.48
CHMP4A-201ENST00000347519 FANCEQ9HB96 536 aa18.03■□□□□ 0.48
CHMP4A-201ENST00000347519 NOP53Q9NZM5 478 aaKnown RBP18.03■□□□□ 0.48
CHMP4A-201ENST00000347519 MCM8Q9UJA3 840 aa18.03■□□□□ 0.48
CHMP4A-201ENST00000347519 RARRES3Q9UL19 164 aa18.03■□□□□ 0.48
CHMP4A-201ENST00000347519 TMED5Q9Y3A6 229 aa18.03■□□□□ 0.48
CHMP4A-201ENST00000347519 NAALAD2Q9Y3Q0 740 aa18.03■□□□□ 0.48
CHMP4A-201ENST00000347519 SLC22A7Q9Y694 548 aa18.03■□□□□ 0.48
CHMP4A-201ENST00000347519 SCN2AQ99250 2005 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 A0A0A6YYC8 382 aaPredicted RBP18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 FAM149AA5PLN7 773 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 I3L1I5 382 aaPredicted RBP18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 SGK494L7N484 410 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 ANKRD28O15084 1053 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 ZNF749O43361 778 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 ANXA4P09525 319 aaPredicted RBP18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 CDK4P11802 303 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 FGF5P12034 268 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 OLR1P78380 273 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 RUNX2Q13950 521 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 PTGR1Q14914 329 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 PWWP2BQ6NUJ5 590 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 CYP20A1Q6UW02 462 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 ABHD13Q7L211 337 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 NUDT13Q86X67 352 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 METTL27Q8N6F8 245 aaPredicted RBP18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 TTC29Q8NA56 475 aaPredicted RBP18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 OR5T3Q8NGG3 340 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 C16orf78Q8WTQ4 265 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 LIN37Q96GY3 246 aaPredicted RBP18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 TEX37Q96LM6 180 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 TSSK3Q96PN8 268 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 STRADBQ9C0K7 418 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 CUTCQ9NTM9 273 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 ARMCX1Q9P291 453 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 DHCR7Q9UBM7 475 aaKnown RBP18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 ADAM29Q9UKF5 820 aa18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 EIF3LQ9Y262 564 aaKnown RBP18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 TMEM184BQ9Y519 407 aaPredicted RBP18.02■□□□□ 0.47
CHMP4A-201ENST00000347519 DCDC2BA2VCK2 349 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 URADA6NGE7 173 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 C9JVG2 144 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 GALR3O60755 368 aaPredicted RBP18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 MYO1DO94832 1006 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 SCELO95171 688 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 GPX3P22352 226 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 ARFIP1P53367 373 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 EMP3P54852 163 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 HNRNPH2P55795 449 aaKnown RBP18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 UFM1P61960 85 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 TGM3Q08188 693 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 MAD2L1Q13257 205 aaPredicted RBP18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 SLAMF1Q13291 335 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 CCNYL2Q5T2Q4 361 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 GARNL3Q5VVW2 1013 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 MRM1Q6IN84 353 aaKnown RBP18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 TLDC1Q6P9B6 456 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 PAOXQ6QHF9 649 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 RAB11FIP2Q7L804 512 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 CLNKQ7Z7G1 428 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 GPR135Q8IZ08 494 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 MMP21Q8N119 569 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 CPSF7Q8N684 471 aaKnown RBP18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 SLC38A9Q8NBW4 561 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 SRFBP1Q8NEF9 429 aaKnown RBP18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 OR9I1Q8NGQ6 314 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 UCN3Q969E3 161 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 CMKLR1Q99788 373 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 BRINP2Q9C0B6 783 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 TRIM33Q9UPN9 1127 aa18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 EXO1Q9UQ84 846 aaKnown RBP18.01■□□□□ 0.47
CHMP4A-201ENST00000347519 CNOT1A5YKK6 2376 aaKnown RBP18■□□□□ 0.47
CHMP4A-201ENST00000347519 ARHGAP10A1A4S6 786 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 B4E171 279 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 TMX2-CTNND1H3BSU7 103 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 RDH16O75452 317 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 PRPS2P11908 318 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 ACPPP15309 386 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 ITGAXP20702 1163 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 IL12AP29459 219 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 TSPAN7P41732 249 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 MTTPP55157 894 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 MC1RQ01726 317 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 GABPB1Q06547 395 aaPredicted RBP18■□□□□ 0.47
CHMP4A-201ENST00000347519 TARDBPQ13148 414 aaKnown RBP eCLIP18■□□□□ 0.47
CHMP4A-201ENST00000347519 HERC3Q15034 1050 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 GSTA3Q16772 222 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 NDUFA9Q16795 377 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 PDCD4Q53EL6 469 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms