RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 MUS81Q96NY9 551 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 MEAF6Q9HAF1 191 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 TMEM184CQ9NVA4 438 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 GHRLQ9UBU3 117 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 MED31Q9Y3C7 131 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 DNAJC15Q9Y5T4 150 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 SHISA7A6NL88 538 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.49□□□□□ -0.73
CLCN6-202ENST00000346436 SAP18O00422 153 aaKnown RBP10.49□□□□□ -0.73
CLCN6-202ENST00000346436 KIAA0355O15063 1070 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 ATP6V1G1O75348 118 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 GJB3O75712 270 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 CD46P15529 392 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 CDK9P50750 372 aaKnown RBP10.49□□□□□ -0.73
CLCN6-202ENST00000346436 ZMYND11Q15326 602 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 PDZK1Q5T2W1 519 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 KIAA0319Q5VV43 1072 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 GOLGA7Q7Z5G4 137 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 MRPL10Q7Z7H8 261 aaKnown RBP10.49□□□□□ -0.73
CLCN6-202ENST00000346436 SLC15A3Q8IY34 581 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 MEIOBQ8N635 442 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 ISOC1Q96CN7 298 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 SLC25A36Q96CQ1 311 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 EIF3KQ9UBQ5 218 aaKnown RBP10.49□□□□□ -0.73
CLCN6-202ENST00000346436 ANKRD66B4E2M5 251 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 TFECO14948 347 aaPredicted RBP10.49□□□□□ -0.73
CLCN6-202ENST00000346436 CDH1P12830 882 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 FUT4P22083 530 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 ZNF84P51523 738 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 HSD17B7P56937 341 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 LRP8Q14114 963 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 SPANXN4Q5MJ08 99 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 NANOGP8Q6NSW7 305 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 CEACAM20Q6UY09 585 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 LRRTM3Q86VH5 581 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 NANOGQ9H9S0 305 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 IGSF5Q9NSI5 407 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 SMOXQ9NWM0 555 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 SOBPA7XYQ1 873 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 FTCDNL1E5RQL4 147 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 H0YJX3 145 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 H3BNC9 293 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 HCN1O60741 890 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 CTSKP43235 329 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 LEPRP48357 1165 aaKnown RBP10.49□□□□□ -0.73
CLCN6-202ENST00000346436 RPS14P62263 151 aaKnown RBP10.49□□□□□ -0.73
CLCN6-202ENST00000346436 PTGR1Q14914 329 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 SYT16Q17RD7 645 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 RTP2Q5QGT7 225 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 MARCH8Q5T0T0 291 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 RNF111Q6ZNA4 994 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 C6orf120Q7Z4R8 191 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 ADGRD2Q7Z7M1 963 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 SYVN1Q86TM6 617 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 TMEM151BQ8IW70 566 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 ALDH16A1Q8IZ83 802 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 GTPBP3Q969Y2 492 aaKnown RBP10.49□□□□□ -0.73
CLCN6-202ENST00000346436 CHCHD6Q9BRQ6 235 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 MUC13Q9H3R2 512 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 ERGIC3Q9Y282 383 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 ENTPD2Q9Y5L3 495 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 IRAK3Q9Y616 596 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 NRAPQ86VF7 1730 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 NPIPA2E9PIF3 369 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 NPIPA3F8WFD2 350 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 MID1O15344 667 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 RAB25P57735 213 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 NFKB2Q00653 900 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 TMEM115Q12893 351 aaPredicted RBP10.49□□□□□ -0.73
CLCN6-202ENST00000346436 LSAMPQ13449 338 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 RAB39AQ14964 217 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 RFX4Q33E94 735 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 ASPGQ86U10 573 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 C3orf58Q8NDZ4 430 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 C1orf109Q9NX04 203 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 RNF11Q9Y3C5 154 aa10.49□□□□□ -0.73
CLCN6-202ENST00000346436 PCDHGA12O60330 932 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 PRAMEF11O60813 436 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 NR2F6P10588 404 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 SEMA3AQ14563 771 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 CMPK2Q5EBM0 449 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 P2RY8Q86VZ1 359 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 LSMEM2Q8N112 164 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 AMER2Q8N7J2 671 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 OR56A1Q8NGH5 318 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 DNAJB8Q8NHS0 232 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 IMP4Q96G21 291 aaKnown RBP10.48□□□□□ -0.73
CLCN6-202ENST00000346436 RADILQ96JH8 1075 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 COMMD4Q9H0A8 199 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 TOR3AQ9H497 397 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 CCNB1IP1Q9NPC3 277 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 COQ3Q9NZJ6 369 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 DNAJB9Q9UBS3 223 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 PCDH7O60245 1069 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 UGT2B11O75310 529 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 OPN1SWP03999 348 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 CEBPBP17676 345 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 MAGEA6P43360 314 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 AFF3P51826 1226 aaKnown RBP10.48□□□□□ -0.73
CLCN6-202ENST00000346436 EEFSECP57772 596 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms