RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 CDH4P55283 916 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 GAB1Q13480 694 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 ARHGEF7Q14155 803 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 ZXDCQ2QGD7 858 aaPredicted RBP9.28□□□□□ -0.92
HOXA1-201ENST00000343060 DDI2Q5TDH0 399 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 FRG2Q64ET8 278 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 FRMPD2BQ6IN97 320 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 ZNF770Q6IQ21 691 aaPredicted RBP9.28□□□□□ -0.92
HOXA1-201ENST00000343060 NCEH1Q6PIU2 408 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 KLHL17Q6TDP4 642 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 PAMR1Q6UXH9 720 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 PTCHD4Q6ZW05 846 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 PHC2Q8IXK0 858 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 NANOGP1Q8N7R0 232 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 PROKR2Q8NFJ6 384 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 OR4M2Q8NGB6 313 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 KLHL6Q8WZ60 621 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 AP2M1Q96CW1 435 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 C11orf24Q96F05 449 aaPredicted RBP9.28□□□□□ -0.92
HOXA1-201ENST00000343060 TMEM80Q96HE8 168 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 MAGEB10Q96LZ2 347 aaPredicted RBP9.28□□□□□ -0.92
HOXA1-201ENST00000343060 FRG2BQ96QU4 278 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 PRRG3Q9BZD7 231 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 ING3Q9NXR8 418 aa9.28□□□□□ -0.92
HOXA1-201ENST00000343060 PRAMEF4O60810 478 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 NBNO60934 754 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 ENTPD6O75354 484 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 SLC43A1O75387 559 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 TNFRSF21O75509 655 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 CSF2P04141 144 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 LAMP1P11279 417 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 ACRV1P26436 265 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 PTBP1P26599 531 aaKnown RBP eCLIP9.27□□□□□ -0.93
HOXA1-201ENST00000343060 SLC6A4P31645 630 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 SLC9A3P48764 834 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 RAB25P57735 213 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 RRAS2P62070 204 aaPredicted RBP9.27□□□□□ -0.93
HOXA1-201ENST00000343060 PURAQ00577 322 aaKnown RBP9.27□□□□□ -0.93
HOXA1-201ENST00000343060 RIN1Q13671 783 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 MBTPS1Q14703 1052 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 FAM214AQ32MH5 1076 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 PTCHD3Q3KNS1 767 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 C10orf120Q5SQS8 335 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 PRAMEF9Q5VWM5 478 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 LYPLAL1Q5VWZ2 237 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 GRAMD2AQ8IUY3 354 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 C9orf62Q8N4C0 152 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 ZNF557Q8N988 423 aaPredicted RBP9.27□□□□□ -0.93
HOXA1-201ENST00000343060 MAL2Q969L2 176 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 DIRAS2Q96HU8 199 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 SLC6A18Q96N87 628 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 PIP5K1AQ99755 562 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 MARVELD1Q9BSK0 173 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 EBPLQ9BY08 206 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 PPP1R3EQ9H7J1 279 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 PAK6Q9NQU5 681 aaPredicted RBP9.27□□□□□ -0.93
HOXA1-201ENST00000343060 TMEM39AQ9NV64 488 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 TXNL4BQ9NX01 149 aaKnown RBP9.27□□□□□ -0.93
HOXA1-201ENST00000343060 CLEC2DQ9UHP7 191 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 PCDH7O60245 1069 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 TSPAN3O60637 253 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 CDRT1O95170 752 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 PRAMEF1O95521 474 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 PRAMEF12O95522 483 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 POMCP01189 267 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 FHP07954 510 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 TSPAN19P0C672 248 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 SRCP12931 536 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 TNFRSF1BP20333 461 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 AQP1P29972 269 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 UQCRC1P31930 480 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 IRS1P35568 1242 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 DAB2P98082 770 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 RBBP4Q09028 425 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 HNRNPA0Q13151 305 aaKnown RBP9.27□□□□□ -0.93
HOXA1-201ENST00000343060 MAB21L1Q13394 359 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 NFATC2Q13469 925 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 ZBTB37Q5TC79 503 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 METAP1DQ6UB28 335 aaPredicted RBP9.27□□□□□ -0.93
HOXA1-201ENST00000343060 TLK2Q86UE8 772 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 CFAP52Q8N1V2 620 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 CAMKK1Q8N5S9 505 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 OR9Q1Q8NGQ5 310 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 OR52J3Q8NH60 311 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 DNAJA4Q8WW22 397 aaPredicted RBP9.27□□□□□ -0.93
HOXA1-201ENST00000343060 GEMIN6Q8WXD5 167 aaKnown RBP9.27□□□□□ -0.93
HOXA1-201ENST00000343060 FBXO32Q969P5 355 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 SH3KBP1Q96B97 665 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 METTL2AQ96IZ6 378 aaKnown RBP9.27□□□□□ -0.93
HOXA1-201ENST00000343060 SPATA17Q96L03 361 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 GPR137Q96N19 417 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 DUSP26Q9BV47 211 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 HDHD5Q9BXW7 423 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 ANKRA2Q9H9E1 313 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 MOSPD1Q9UJG1 213 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 KCND3Q9UK17 655 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 ELF5Q9UKW6 265 aaPredicted RBP9.27□□□□□ -0.93
HOXA1-201ENST00000343060 OGDHLQ9ULD0 1010 aa9.27□□□□□ -0.93
HOXA1-201ENST00000343060 NDRG2Q9UN36 371 aaKnown RBP9.27□□□□□ -0.93
HOXA1-201ENST00000343060 PCDHGB7Q9Y5F8 929 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms