RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 AGPAT4Q9NRZ5 378 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 CXXC1Q9P0U4 656 aaPredicted RBP13.02□□□□□ -0.32
TMEM248-201ENST00000341567 ING4Q9UNL4 249 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 DNMT3AQ9Y6K1 912 aaPredicted RBP13.02□□□□□ -0.32
TMEM248-201ENST00000341567 SESN1Q9Y6P5 492 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 ARID1AO14497 2285 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 CPSF4LA6NMK7 179 aaKnown RBP13.02□□□□□ -0.33
TMEM248-201ENST00000341567 TMX2-CTNND1H3BSU7 103 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 CEBPBP17676 345 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 KELP23276 732 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 ADRA1AP35348 466 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 SOX9P48436 509 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 ATP4BP51164 291 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 CTSCP53634 463 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 ST3GAL4Q11206 333 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 TCEAL5Q5H9L2 206 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 ANKRD13BQ86YJ7 626 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 TEX47Q8TBZ9 253 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 AP3S1Q92572 193 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 ZNF607Q96SK3 696 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 RC3H2Q9HBD1 1191 aaKnown RBP13.02□□□□□ -0.33
TMEM248-201ENST00000341567 DNAJC27Q9NZQ0 273 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 SNX7Q9UNH6 387 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 DYRK3O43781 588 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 CCNDBP1O95273 360 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 STSP08842 583 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 PRG2P13727 222 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 ABHD18Q0P651 414 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 TARDBPQ13148 414 aaKnown RBP eCLIP13.02□□□□□ -0.335e-7■■■■■ 27.6
TMEM248-201ENST00000341567 MZT2AQ6P582 158 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 HOMEZQ8IX15 550 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 SPARTQ8N0X7 666 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 MAL2Q969L2 176 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 POLR2J3Q9H1A7 115 aaKnown RBP13.02□□□□□ -0.33
TMEM248-201ENST00000341567 MRPS30Q9NP92 439 aaKnown RBP13.02□□□□□ -0.33
TMEM248-201ENST00000341567 VAPAQ9P0L0 249 aa13.02□□□□□ -0.33
TMEM248-201ENST00000341567 TRIP12Q14669 1992 aaPredicted RBP13.01□□□□□ -0.33
TMEM248-201ENST00000341567 SLC35F4A4IF30 521 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 KAT7O95251 611 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 EN2P19622 333 aaPredicted RBP13.01□□□□□ -0.33
TMEM248-201ENST00000341567 TNFRSF1BP20333 461 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 IRS1P35568 1242 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 PON2Q15165 354 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 LRRC26Q2I0M4 334 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 IPCEF1Q8WWN9 437 aaPredicted RBP13.01□□□□□ -0.33
TMEM248-201ENST00000341567 PIK3R3Q92569 461 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 DNASE1L2Q92874 299 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 TRIP11Q15643 1979 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 H3BQ06 376 aaPredicted RBP13.01□□□□□ -0.33
TMEM248-201ENST00000341567 MID1O15344 667 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 NME6O75414 186 aaPredicted RBP13.01□□□□□ -0.33
TMEM248-201ENST00000341567 BCHEP06276 602 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 C6P13671 934 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 ZNF30P17039 623 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 ZNF10P21506 573 aaPredicted RBP13.01□□□□□ -0.33
TMEM248-201ENST00000341567 RPL3P39023 403 aaKnown RBP13.01□□□□□ -0.33
TMEM248-201ENST00000341567 AVPR1BP47901 424 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 SLC6A11P48066 632 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 HNMTP50135 292 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 NHSL2Q5HYW2 709 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 CLEC12AQ5QGZ9 265 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.01□□□□□ -0.33
TMEM248-201ENST00000341567 BORAQ6PGQ7 559 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 SH2D5Q6ZV89 423 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 ZNF761Q86XN6 746 aaPredicted RBP13.01□□□□□ -0.33
TMEM248-201ENST00000341567 FCGR1BQ92637 280 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 RPL3LQ92901 407 aaKnown RBP13.01□□□□□ -0.33
TMEM248-201ENST00000341567 ZFP3Q96NJ6 502 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 TMEM246Q9BRR3 403 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 ZNF224Q9NZL3 707 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 CEP250Q9BV73 2442 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 KIAA1217Q5T5P2 1943 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 EDDM13A0A1B0GTR0 161 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 SLC30A4O14863 429 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 PDHA2P29803 388 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 RPL4P36578 427 aaKnown RBP13.01□□□□□ -0.33
TMEM248-201ENST00000341567 NCBP2P52298 156 aaKnown RBP eCLIP13.01□□□□□ -0.33
TMEM248-201ENST00000341567 RGS8P57771 180 aaPredicted RBP13.01□□□□□ -0.33
TMEM248-201ENST00000341567 SPCS2Q15005 226 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 UBE2UQ5VVX9 321 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 LILRA3Q8N6C8 439 aaPredicted RBP13.01□□□□□ -0.33
TMEM248-201ENST00000341567 DTX3Q8N9I9 347 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 ZNF784Q8NCA9 323 aaPredicted RBP13.01□□□□□ -0.33
TMEM248-201ENST00000341567 LKAAEAR1Q8TD35 194 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 APIPQ96GX9 242 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 F2RL3Q96RI0 385 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 TUBA1CQ9BQE3 449 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 TMED5Q9Y3A6 229 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 PCDHGA10Q9Y5H3 936 aa13.01□□□□□ -0.33
TMEM248-201ENST00000341567 B4DGG1 531 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 DNAJB1P25685 340 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 CD97P48960 835 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 PGDP52209 483 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 ZNF140P52738 457 aaPredicted RBP13□□□□□ -0.33
TMEM248-201ENST00000341567 SMU1Q2TAY7 513 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 TBRG1Q3YBR2 411 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 CADM2Q8N3J6 435 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 NFKBIDQ8NI38 313 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 WFIKKN2Q8TEU8 576 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 HSPB11Q9Y547 144 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms