RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 PAGE3Q5JUK9 113 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 GET4Q7L5D6 327 aaPredicted RBP8.4□□□□□ -1.07
RTN3-202ENST00000339997 RAB11FIP2Q7L804 512 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 GPRIN1Q7Z2K8 1008 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 IGFN1Q86VF2 1251 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 PAQR7Q86WK9 346 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 ZNF101Q8IZC7 436 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 FBXO22Q8NEZ5 403 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 TSPEARQ8WU66 669 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 KIAA1191Q96A73 305 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 C1QTNF7Q9BXJ2 289 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.4□□□□□ -1.07
RTN3-202ENST00000339997 DPAGT1Q9H3H5 408 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 PAK6Q9NQU5 681 aaPredicted RBP8.4□□□□□ -1.07
RTN3-202ENST00000339997 MYEF2Q9P2K5 600 aaKnown RBP8.4□□□□□ -1.07
RTN3-202ENST00000339997 MGAT4BQ9UQ53 548 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 POFUT2Q9Y2G5 429 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 PRSS51A0A1B0GVH4 220 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 GRXCR1A8MXD5 290 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 SLC1A7O00341 560 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 SLC22A2O15244 555 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 CAPN15O75808 1086 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 POP4O95707 220 aaKnown RBP8.4□□□□□ -1.07
RTN3-202ENST00000339997 ALPPP05187 535 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 GDI2P50395 445 aaKnown RBP8.4□□□□□ -1.07
RTN3-202ENST00000339997 PRKCDQ05655 676 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 PIGGQ5H8A4 983 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 ZCCHC12Q6PEW1 402 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 CCDC116Q8IYX3 515 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 IQCF1Q8N6M8 205 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 NPWQ8N729 165 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 INO80EQ8NBZ0 244 aaPredicted RBP8.4□□□□□ -1.07
RTN3-202ENST00000339997 JPH3Q8WXH2 748 aaPredicted RBP8.4□□□□□ -1.07
RTN3-202ENST00000339997 PEX13Q92968 403 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 SH3YL1Q96HL8 342 aaPredicted RBP8.4□□□□□ -1.07
RTN3-202ENST00000339997 MSLNLQ96KJ4 702 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 DHRS1Q96LJ7 313 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 UROC1Q96N76 676 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 SMIM14Q96QK8 99 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 MGME1Q9BQP7 344 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 XYLT2Q9H1B5 865 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 OR51I1Q9H343 314 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 TXNRD2Q9NNW7 524 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 CRTAC1Q9NQ79 661 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 C14orf105Q9NVL8 296 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 TAS2R10Q9NYW0 307 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 ATXN7L1Q9ULK2 861 aaPredicted RBP8.4□□□□□ -1.07
RTN3-202ENST00000339997 KCNK6Q9Y257 313 aa8.4□□□□□ -1.07
RTN3-202ENST00000339997 H7BY64 318 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 ADH1AP07327 375 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 SLC5A2P31639 672 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 GRK6P43250 576 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 PPP3R1P63098 170 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 SMN1Q16637 294 aaKnown RBP8.39□□□□□ -1.07
RTN3-202ENST00000339997 EXOC3L2Q2M3D2 409 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 PSAPL1Q6NUJ1 521 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 RANBP3LQ86VV4 465 aaPredicted RBP8.39□□□□□ -1.07
RTN3-202ENST00000339997 ANKRD13BQ86YJ7 626 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 MMAAQ8IVH4 418 aaKnown RBP8.39□□□□□ -1.07
RTN3-202ENST00000339997 RPL3LQ92901 407 aaKnown RBP8.39□□□□□ -1.07
RTN3-202ENST00000339997 PRAP1Q96NZ9 151 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 SECISBP2Q96T21 854 aaKnown RBP8.39□□□□□ -1.07
RTN3-202ENST00000339997 NPY6RQ99463 290 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 C17orf62Q9BQA9 187 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 PRRG4Q9BZD6 226 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 XKR8Q9H6D3 395 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 SEC61A2Q9H9S3 476 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 KCNK13Q9HB14 408 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 ZBTB20Q9HC78 741 aaPredicted RBP8.39□□□□□ -1.07
RTN3-202ENST00000339997 TAS2R3Q9NYW6 316 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 MOCS1Q9NZB8 636 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 SLAMF8Q9P0V8 285 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 USP22Q9UPT9 525 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 CMAHPQ9Y471 501 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 KANTRA0A1W2PQU2 76 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 MEIS3P2A8K0S8 358 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 NDUFS4O43181 175 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 PCDHGA12O60330 932 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 HLA-DPB1P04440 258 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 CLUP10909 449 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 KCNA5P22460 613 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 DNASE1P24855 282 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 PYCR1P32322 319 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 HOXD12P35452 270 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 MTA1Q13330 715 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 OCLNQ16625 522 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 C10orf62Q5T681 223 aaPredicted RBP8.39□□□□□ -1.07
RTN3-202ENST00000339997 DESI1Q6ICB0 168 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 AGTRAPQ6RW13 159 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 LRRN1Q6UXK5 716 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 TIFABQ6ZNK6 161 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 DGLUCYQ7Z3D6 616 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 THOC6Q86W42 341 aaKnown RBP8.39□□□□□ -1.07
RTN3-202ENST00000339997 SLITRK4Q8IW52 837 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 PROKR2Q8NFJ6 384 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 OR2L8Q8NGY9 312 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 OR2L2Q8NH16 312 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 GEMIN6Q8WXD5 167 aaKnown RBP8.39□□□□□ -1.07
RTN3-202ENST00000339997 SOCS4Q8WXH5 440 aa8.39□□□□□ -1.07
RTN3-202ENST00000339997 IL17FQ96PD4 163 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms