RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 NOTCH2Q04721 2471 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 TCRBV16S1A1N1A0A5B0 115 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 ASPDHA6ND91 283 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 SAGE2PA6NJ88 616 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 EFCAB8A8MWE9 144 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 KLRC4-KLRK1H3BQV0 150 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 PRRG2O14669 202 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 CLGNO14967 610 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 MAN1A2O60476 641 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 SLC25A12O75746 678 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 NEURL1O76050 574 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 SMIM10L1P0DMW3 83 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 COX6B1P14854 86 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 GSTM2P28161 218 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 HLCSP50747 726 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 CLCN2P51788 898 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 MLF1P58340 268 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 TAS2R39P59534 338 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 TGM3Q08188 693 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 SLC13A2Q13183 592 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 C3AR1Q16581 482 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 PPP1R3AQ16821 1122 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 ZNF630Q2M218 657 aaPredicted RBP9.98□□□□□ -0.81
CAPN3-202ENST00000337571 BNC2Q6ZN30 1099 aaPredicted RBP9.98□□□□□ -0.81
CAPN3-202ENST00000337571 ZC3HC1Q86WB0 502 aaKnown RBP9.98□□□□□ -0.81
CAPN3-202ENST00000337571 CREG2Q8IUH2 290 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 ZBED8Q8IZ13 594 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 GHDCQ8N2G8 530 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 TCAIMQ8N3R3 496 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 KIF2BQ8N4N8 673 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 TMEM156Q8N614 296 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 PYROXD1Q8WU10 500 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 CDKL2Q92772 493 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 TSPAN17Q96FV3 270 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 SMIM10Q96HG1 83 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 SEC16BQ96JE7 1060 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 FRMD6Q96NE9 622 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 NPAS2Q99743 824 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 CCDC77Q9BR77 488 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 NPLQ9BXD5 320 aaPredicted RBP9.98□□□□□ -0.81
CAPN3-202ENST00000337571 SPNS1Q9H2V7 528 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 PLAC1Q9HBJ0 212 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 POPDC3Q9HBV1 291 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 MOCS1Q9NZB8 636 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 RNF14Q9UBS8 474 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 TINAGQ9UJW2 476 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 MRPS33Q9Y291 106 aaKnown RBP9.98□□□□□ -0.81
CAPN3-202ENST00000337571 MMACHCQ9Y4U1 282 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 PSAT1Q9Y617 370 aa9.98□□□□□ -0.81
CAPN3-202ENST00000337571 LRIT2A6NDA9 550 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 NCF1BA6NI72 391 aaPredicted RBP9.97□□□□□ -0.81
CAPN3-202ENST00000337571 NCF1CA8MVU1 366 aaPredicted RBP9.97□□□□□ -0.81
CAPN3-202ENST00000337571 B3GALT2O43825 422 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 NME2P1O60361 137 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 MYO1DO94832 1006 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 SEC31AO94979 1220 aaKnown RBP9.97□□□□□ -0.81
CAPN3-202ENST00000337571 NCF1P14598 390 aaPredicted RBP9.97□□□□□ -0.81
CAPN3-202ENST00000337571 ZNF24P17028 368 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 AGAP20933 346 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 NME2P22392 152 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 PTGER4P35408 488 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 GDF5P43026 501 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 HSD17B7P56937 341 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 POU4F1Q01851 419 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 HYAL2Q12891 473 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 CALCOCO2Q13137 446 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 BMPR2Q13873 1038 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 RCN2Q14257 317 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 ZNF460Q14592 562 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 TSNQ15631 228 aaKnown RBP9.97□□□□□ -0.81
CAPN3-202ENST00000337571 TRIM40Q6P9F5 258 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 GPSM1Q86YR5 675 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 CA13Q8N1Q1 262 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 POGLUT1Q8NBL1 392 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 B3GNT7Q8NFL0 401 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 CREB3L4Q8TEY5 395 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 GAL3ST3Q96A11 431 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 NAPGQ99747 312 aaPredicted RBP9.97□□□□□ -0.81
CAPN3-202ENST00000337571 TRIM51Q9BSJ1 452 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 PITHD1Q9GZP4 211 aaPredicted RBP9.97□□□□□ -0.81
CAPN3-202ENST00000337571 RHOJQ9H4E5 214 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 NECTIN3Q9NQS3 549 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 PRTFDC1Q9NRG1 225 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 PNO1Q9NRX1 252 aaKnown RBP9.97□□□□□ -0.81
CAPN3-202ENST00000337571 WWOXQ9NZC7 414 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 FBXW2Q9UKT8 454 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 IKZF3Q9UKT9 509 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 ZNF835Q9Y2P0 537 aa9.97□□□□□ -0.81
CAPN3-202ENST00000337571 KLF13Q9Y2Y9 288 aaPredicted RBP9.97□□□□□ -0.81
CAPN3-202ENST00000337571 MYO9AB2RTY4 2548 aa9.96□□□□□ -0.81
CAPN3-202ENST00000337571 TRBV11-1A0A0K0K1C0 115 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 SYNDIG1LA6NDD5 238 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 TFECO14948 347 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-202ENST00000337571 ERI3O43414 337 aaKnown RBP9.96□□□□□ -0.82
CAPN3-202ENST00000337571 CLEC3AO75596 197 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 ZFAND5O76080 213 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 S100BP04271 92 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-202ENST00000337571 SNRPB2P08579 225 aaKnown RBP9.96□□□□□ -0.82
CAPN3-202ENST00000337571 CCDC166P0CW27 439 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 PRF1P14222 555 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms