RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SCELO95171 688 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 ANXA4P09525 319 aaPredicted RBP20.42■□□□□ 0.86
TPM1-204ENST00000334895 IDO1P14902 403 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 HIST1H1TP22492 207 aaPredicted RBP20.42■□□□□ 0.86
TPM1-204ENST00000334895 ATP5A1P25705 553 aaKnown RBP20.42■□□□□ 0.86
TPM1-204ENST00000334895 CERS1P27544 350 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 MRPL19P49406 292 aaKnown RBP20.42■□□□□ 0.86
TPM1-204ENST00000334895 ITGA1P56199 1179 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 BTN3A2P78410 334 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 GSTA3Q16772 222 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 DEFB134Q4QY38 66 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 HES3Q5TGS1 186 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 ABHD13Q7L211 337 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 CLHC1Q8NHS4 586 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 EGLN2Q96KS0 407 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 CSO75390 466 aaKnown RBP20.41■□□□□ 0.86
TPM1-204ENST00000334895 MYO1DO94832 1006 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 CCL4P13236 92 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 IL1RNP18510 177 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 GPX3P22352 226 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 MAPK1P28482 360 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 ATP4BP51164 291 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 NME5P56597 212 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 FOXM1Q08050 763 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 TGM3Q08188 693 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 SQLEQ14534 574 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 GRM7Q14831 915 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 CLNKQ7Z7G1 428 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 ACOT4Q8N9L9 421 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.41■□□□□ 0.86
TPM1-204ENST00000334895 TEX37Q96LM6 180 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 TSSK3Q96PN8 268 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 LRRC37BQ96QE4 947 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 CCDC106Q9BWC9 280 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 FANCEQ9HB96 536 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 APMAPQ9HDC9 416 aa20.41■□□□□ 0.86
TPM1-204ENST00000334895 FOXS1O43638 330 aa20.4■□□□□ 0.86
TPM1-204ENST00000334895 GALR3O60755 368 aaPredicted RBP20.4■□□□□ 0.86
TPM1-204ENST00000334895 DNAJB6O75190 326 aa20.4■□□□□ 0.86
TPM1-204ENST00000334895 TIAF1O95411 115 aa20.4■□□□□ 0.86
TPM1-204ENST00000334895 PRPS2P11908 318 aa20.4■□□□□ 0.86
TPM1-204ENST00000334895 TSFMP43897 325 aaKnown RBP20.4■□□□□ 0.86
TPM1-204ENST00000334895 EMP3P54852 163 aa20.4■□□□□ 0.86
TPM1-204ENST00000334895 PDCD4Q53EL6 469 aaKnown RBP20.4■□□□□ 0.86
TPM1-204ENST00000334895 CCNYL2Q5T2Q4 361 aa20.4■□□□□ 0.86
TPM1-204ENST00000334895 GARNL3Q5VVW2 1013 aa20.4■□□□□ 0.86
TPM1-204ENST00000334895 PAGE2Q7Z2X7 111 aa20.4■□□□□ 0.86
TPM1-204ENST00000334895 SHISA5Q8N114 240 aa20.4■□□□□ 0.86
TPM1-204ENST00000334895 ZCCHC7Q8N3Z6 543 aaKnown RBP20.4■□□□□ 0.86
TPM1-204ENST00000334895 OR9I1Q8NGQ6 314 aa20.4■□□□□ 0.86
TPM1-204ENST00000334895 NUDT8Q8WV74 236 aa20.4■□□□□ 0.86
TPM1-204ENST00000334895 ERP27Q96DN0 273 aa20.4■□□□□ 0.86
TPM1-204ENST00000334895 SERTAD3Q9UJW9 196 aa20.4■□□□□ 0.86
TPM1-204ENST00000334895 GNG14A0A1W2PPG7 69 aa20.39■□□□□ 0.86
TPM1-204ENST00000334895 MTTPP55157 894 aa20.39■□□□□ 0.86
TPM1-204ENST00000334895 UFM1P61960 85 aa20.39■□□□□ 0.86
TPM1-204ENST00000334895 HERC3Q15034 1050 aa20.39■□□□□ 0.86
TPM1-204ENST00000334895 MRM1Q6IN84 353 aaKnown RBP20.39■□□□□ 0.86
TPM1-204ENST00000334895 TLDC1Q6P9B6 456 aa20.39■□□□□ 0.86
TPM1-204ENST00000334895 PAOXQ6QHF9 649 aa20.39■□□□□ 0.86
TPM1-204ENST00000334895 TREML1Q86YW5 311 aa20.39■□□□□ 0.86
TPM1-204ENST00000334895 PARP9Q8IXQ6 854 aa20.39■□□□□ 0.86
TPM1-204ENST00000334895 GPR135Q8IZ08 494 aa20.39■□□□□ 0.86
TPM1-204ENST00000334895 TTC29Q8NA56 475 aaPredicted RBP20.39■□□□□ 0.86
TPM1-204ENST00000334895 C16orf78Q8WTQ4 265 aa20.39■□□□□ 0.86
TPM1-204ENST00000334895 CUTCQ9NTM9 273 aa20.39■□□□□ 0.86
TPM1-204ENST00000334895 RARRES3Q9UL19 164 aa20.39■□□□□ 0.86
TPM1-204ENST00000334895 CLCA2Q9UQC9 943 aa20.39■□□□□ 0.86
TPM1-204ENST00000334895 NAALAD2Q9Y3Q0 740 aa20.39■□□□□ 0.86
TPM1-204ENST00000334895 PMS2P1A4D2B8 440 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 ZNF860A6NHJ4 632 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 ZNF749O43361 778 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 IL12AP29459 219 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 MC2RQ01718 297 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 ZNF763Q0D2J5 394 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 KLF10Q13118 480 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 FAM53BQ14153 422 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 FOXR1Q6PIV2 292 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 MIER2Q8N344 545 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 KRTCAP2Q8N6L1 136 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 OR9A4Q8NGU2 314 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 PROKR1Q8TCW9 393 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 PMEPA1Q969W9 287 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 LIN37Q96GY3 246 aaPredicted RBP20.38■□□□□ 0.85
TPM1-204ENST00000334895 DEPDC7Q96QD5 511 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 EXO1Q9UQ84 846 aaKnown RBP20.38■□□□□ 0.85
TPM1-204ENST00000334895 LOXL2Q9Y4K0 774 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 A0A0A6YYC8 382 aaPredicted RBP20.38■□□□□ 0.85
TPM1-204ENST00000334895 A0A1W2PNU3 283 aaPredicted RBP20.38■□□□□ 0.85
TPM1-204ENST00000334895 CAPN14A8MX76 684 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 C9JVG2 144 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 I3L1I5 382 aaPredicted RBP20.38■□□□□ 0.85
TPM1-204ENST00000334895 SGK494L7N484 410 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 FGF5P12034 268 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 ZFP36L2P47974 494 aaKnown RBP20.38■□□□□ 0.85
TPM1-204ENST00000334895 MAPK12P53778 367 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 HNRNPH2P55795 449 aaKnown RBP20.38■□□□□ 0.85
TPM1-204ENST00000334895 STX1BP61266 288 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 OLR1P78380 273 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 SLAMF1Q13291 335 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms