RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 IQCF1Q8N6M8 205 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 OR51G2Q8NGK0 314 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 DNASE1L2Q92874 299 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 CCDC120Q96HB5 630 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 MAELQ96JY0 434 aaKnown RBP13.53□□□□□ -0.24
EPHB3-201ENST00000330394 FERD3LQ96RJ6 166 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 NEURL2Q9BR09 285 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 CD8B2A6NJW9 211 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 CD8BP10966 210 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 DNASE1P24855 282 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 SMSP52788 366 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 NFATC2Q13469 925 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 ARHGEF6Q15052 776 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 LRRTM3Q86VH5 581 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 MFSD6LQ8IWD5 586 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 LRR1Q96L50 414 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 MRPL9Q9BYD2 267 aaKnown RBP13.53□□□□□ -0.24
EPHB3-201ENST00000330394 AKAP7Q9P0M2 348 aaPredicted RBP13.53□□□□□ -0.24
EPHB3-201ENST00000330394 GLOD5A6NK44 160 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 M0R233 179 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 RB1P06400 928 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 NAGSQ8N159 534 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 SLC7A5P2Q9GIP4 190 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 TUBB1Q9H4B7 451 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 FAM170BA6NMN3 283 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 J3QLW9 94 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 PITPNM1O00562 1244 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 ZNF19P17023 458 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 DGKGP49619 791 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 RGS6P49758 472 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 PTPRRQ15256 657 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 GTF2IRD2BQ6EKJ0 949 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 GTF2IRD2Q86UP8 949 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 RNF175Q8N4F7 328 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 OR5H6Q8NGV6 325 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 OR6K6Q8NGW6 343 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 COQ8AQ8NI60 647 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 CD200R1Q8TD46 325 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 TIFAQ96CG3 184 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 ZBED6CLQ96FA7 236 aaPredicted RBP13.53□□□□□ -0.24
EPHB3-201ENST00000330394 SUSD3Q96L08 255 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 LMAN2LQ9H0V9 348 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 MAGIXQ9H6Y5 334 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 SCML2Q9UQR0 700 aa13.53□□□□□ -0.24
EPHB3-201ENST00000330394 TBC1D3BA6NDS4 549 aa13.52□□□□□ -0.24
EPHB3-201ENST00000330394 RIIAD1A6NNX1 92 aa13.52□□□□□ -0.24
EPHB3-201ENST00000330394 SGCGQ13326 291 aa13.52□□□□□ -0.24
EPHB3-201ENST00000330394 ATAD3CQ5T2N8 411 aa13.52□□□□□ -0.24
EPHB3-201ENST00000330394 SERPINA13PQ6UXR4 307 aa13.52□□□□□ -0.24
EPHB3-201ENST00000330394 CHPFQ8IZ52 775 aa13.52□□□□□ -0.24
EPHB3-201ENST00000330394 ATP6V1C2Q8NEY4 427 aa13.52□□□□□ -0.24
EPHB3-201ENST00000330394 B3GNT7Q8NFL0 401 aa13.52□□□□□ -0.24
EPHB3-201ENST00000330394 CENPOQ9BU64 300 aa13.52□□□□□ -0.24
EPHB3-201ENST00000330394 HTATIP2Q9BUP3 242 aa13.52□□□□□ -0.24
EPHB3-201ENST00000330394 RNF121Q9H920 327 aa13.52□□□□□ -0.24
EPHB3-201ENST00000330394 GPR52Q9Y2T5 361 aa13.52□□□□□ -0.24
EPHB3-201ENST00000330394 HSPE1-MOB4S4R3N1 261 aa13.52□□□□□ -0.24
EPHB3-201ENST00000330394 SRPRAP08240 638 aaKnown RBP13.52□□□□□ -0.25
EPHB3-201ENST00000330394 DRD5P21918 477 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 EDNRBP24530 442 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 HRH2P25021 359 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 TGFBR2P37173 567 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 HNMTP50135 292 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 AP1S2P56377 157 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 RACK1P63244 317 aaKnown RBP13.52□□□□□ -0.25
EPHB3-201ENST00000330394 CBX2Q14781 532 aaPredicted RBP13.52□□□□□ -0.25
EPHB3-201ENST00000330394 MPPE1Q53F39 396 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 BCL2L15Q5TBC7 163 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 ANKRD54Q6NXT1 300 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 POMZP3Q6PJE2 187 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 CNTN4Q8IWV2 1026 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 BRINP2Q9C0B6 783 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 RBM38Q9H0Z9 239 aaKnown RBP13.52□□□□□ -0.25
EPHB3-201ENST00000330394 OR2AG1Q9H205 316 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 MRPL15Q9P015 296 aaKnown RBP13.52□□□□□ -0.25
EPHB3-201ENST00000330394 ZNF69Q9UC07 566 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 IL20RAQ9UHF4 553 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 PCDHB11Q9Y5F2 797 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 PKD1L3Q7Z443 1732 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 K7ERQ8 282 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 CAPN5O15484 640 aaPredicted RBP13.52□□□□□ -0.25
EPHB3-201ENST00000330394 GSRP00390 522 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 TLX1P31314 330 aaPredicted RBP13.52□□□□□ -0.25
EPHB3-201ENST00000330394 CRISP3P54108 245 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 ADARB1P78563 741 aaKnown RBP13.52□□□□□ -0.25
EPHB3-201ENST00000330394 LASP1Q14847 261 aaKnown RBP13.52□□□□□ -0.25
EPHB3-201ENST00000330394 ZNF630Q2M218 657 aaPredicted RBP13.52□□□□□ -0.25
EPHB3-201ENST00000330394 RGMBQ6NW40 437 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 Q6ZSR9 355 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 OR2T11Q8NH01 316 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 ASB15Q8WXK1 588 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 CCDC32Q9BV29 185 aa13.52□□□□□ -0.25
EPHB3-201ENST00000330394 GTPBP2Q9BX10 602 aaKnown RBP13.52□□□□□ -0.25
EPHB3-201ENST00000330394 LOC105369274A0A096LPK9 316 aa13.51□□□□□ -0.25
EPHB3-201ENST00000330394 GJA1P17302 382 aa13.51□□□□□ -0.25
EPHB3-201ENST00000330394 ALAS2P22557 587 aa13.51□□□□□ -0.25
EPHB3-201ENST00000330394 GRSF1Q12849 480 aaKnown RBP eCLIP13.51□□□□□ -0.25
EPHB3-201ENST00000330394 GPRC6AQ5T6X5 926 aa13.51□□□□□ -0.25
EPHB3-201ENST00000330394 REEP3Q6NUK4 255 aa13.51□□□□□ -0.25
EPHB3-201ENST00000330394 PAMR1Q6UXH9 720 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms