RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 MGAT4DA6NG13 374 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 PRR33A8MZF0 331 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 NME4O00746 187 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 EI24O14681 340 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 RGS14O43566 566 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 PLRG1O43660 514 aaKnown RBP12.52□□□□□ -0.4
CPNE1-201ENST00000317677 ATP6V1B2P21281 511 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 POLR2JP52435 117 aaKnown RBP12.52□□□□□ -0.4
CPNE1-201ENST00000317677 SLC7A2P52569 658 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 PTGR1Q14914 329 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 ADNP2Q6IQ32 1131 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 THAP5Q7Z6K1 395 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 ADCK1Q86TW2 530 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 LRRC56Q8IYG6 542 aaPredicted RBP12.52□□□□□ -0.4
CPNE1-201ENST00000317677 POC5Q8NA72 575 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 ROPN1LQ96C74 230 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 ZNF514Q96K75 400 aaPredicted RBP12.52□□□□□ -0.4
CPNE1-201ENST00000317677 DACH2Q96NX9 599 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 C1QTNF2Q9BXJ5 285 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 DSN1Q9H410 356 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 HCN4Q9Y3Q4 1203 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 NEUROG3Q9Y4Z2 214 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 FAM234BA2RU67 622 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 PRR23AA6NEV1 266 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 ERVH48-1M5A8F1 160 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 ANGPT2O15123 496 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 NDUFS2O75306 463 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 EEDO75530 441 aaKnown RBP12.52□□□□□ -0.41
CPNE1-201ENST00000317677 MFN2O95140 757 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 DLGAP3O95886 979 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 ALBP02768 609 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 CCDC159P0C7I6 412 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 TRAPPC2P0DI81 140 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 TRAPPC2BP0DI82 140 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 HSD17B1P14061 328 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 HOXB2P14652 356 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 JUPP14923 745 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 DDX5P17844 614 aaKnown RBP12.52□□□□□ -0.41
CPNE1-201ENST00000317677 TRIM23P36406 574 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 RACK1P63244 317 aaKnown RBP12.52□□□□□ -0.41
CPNE1-201ENST00000317677 PLCL1Q15111 1095 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 ZFP69Q49AA0 526 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 USP39Q53GS9 565 aaKnown RBP12.52□□□□□ -0.41
CPNE1-201ENST00000317677 COQ5Q5HYK3 327 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 SNAP47Q5SQN1 464 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 DESI1Q6ICB0 168 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 FAM122CQ6P4D5 195 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 GALNT12Q8IXK2 581 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 ADGRG5Q8IZF4 528 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 SLC44A3Q8N4M1 653 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 OXR1Q8N573 874 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 TSPEARQ8WU66 669 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 SELENOMQ8WWX9 145 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 EDAQ92838 391 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 MED8Q96G25 268 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 MUS81Q96NY9 551 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 ZNF717Q9BY31 904 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-201ENST00000317677 MUC13Q9H3R2 512 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 KCNK12Q9HB15 430 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 LRTM1Q9HBL6 345 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 CMTM6Q9NX76 183 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 IL20Q9NYY1 176 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 ACTR3BQ9P1U1 418 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 ABCD2Q9UBJ2 740 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 DLGAP4Q9Y2H0 992 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 A3GALT2U3KPV4 340 aa12.52□□□□□ -0.41
CPNE1-201ENST00000317677 A0A1W2PQU0 124 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 PABPN1LA6NDY0 278 aaKnown RBP12.51□□□□□ -0.41
CPNE1-201ENST00000317677 hCG_2039718K7EN88 272 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 TOR1BO14657 336 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 BET1O15155 118 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 SNX4O95219 450 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 SNAP29O95721 258 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 PCMT1P22061 227 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 SLC6A2P23975 617 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 ELK4P28324 431 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 IGFALSP35858 605 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 HTR3AP46098 478 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 GNPDA1P46926 289 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 DGKQP52824 942 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 ADPRHP54922 357 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 KCNK10P57789 538 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 PPP2CBP62714 309 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 PPP2CAP67775 309 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 MRPS15P82914 257 aaKnown RBP12.51□□□□□ -0.41
CPNE1-201ENST00000317677 DOC2AQ14183 400 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 MAPK11Q15759 364 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 CARTPTQ16568 116 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 ADPRMQ3LIE5 342 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 STEAP3Q658P3 488 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 PRMT9Q6P2P2 845 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 TRMT11Q7Z4G4 463 aaKnown RBP12.51□□□□□ -0.41
CPNE1-201ENST00000317677 VN1R5Q7Z5H4 357 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 R3HCC1LQ7Z5L2 792 aaKnown RBP12.51□□□□□ -0.41
CPNE1-201ENST00000317677 TBC1D21Q8IYX1 336 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 LIX1Q8N485 282 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 MINDY1Q8N5J2 469 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 OR14C36Q8NHC7 312 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 WDR20Q8TBZ3 569 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 LRRC58Q96CX6 371 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms