RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 TEX13BQ9BXU2 312 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 Q9H8V8 135 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 PARVGQ9HBI0 331 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 MID1IP1Q9NPA3 183 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 A4GALTQ9NPC4 353 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 PXMP2Q9NR77 195 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 OLFML3Q9NRN5 406 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 PHPT1Q9NRX4 125 aaPredicted RBP3.75□□□□□ -1.81
SMCO3-201ENST00000316048 GKN1Q9NS71 199 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 TRAF3IP3Q9Y228 551 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 VDAC3Q9Y277 283 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 JRKLQ9Y4A0 524 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 ATAD5Q96QE3 1844 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 FRMPD4Q14CM0 1322 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 TRIP12Q14669 1992 aaPredicted RBP3.75□□□□□ -1.81
SMCO3-201ENST00000316048 A0A1W2PPW3 197 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 HNRNPCL2B2RXH8 293 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 H0YIG0 161 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 CCL24O00175 119 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 SLC22A3O75751 556 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 PGLSO95336 258 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 LYPLA2O95372 231 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 SLC16A8O95907 504 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 SPP1P10451 314 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 EPB41P11171 864 aaKnown RBP3.74□□□□□ -1.81
SMCO3-201ENST00000316048 EPCAMP16422 314 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 B3GALT5-AS1P59052 145 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 PSMC5P62195 406 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 RPA4Q13156 261 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 SPA17Q15506 151 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 ELFN2Q5R3F8 820 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 USP50Q70EL3 339 aaPredicted RBP3.74□□□□□ -1.81
SMCO3-201ENST00000316048 ZNF720Q7Z2F6 126 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 LONP2Q86WA8 852 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 C4orf19Q8IY42 314 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.74□□□□□ -1.81
SMCO3-201ENST00000316048 LMNTD1Q8N9Z9 388 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 GOLGA5Q8TBA6 731 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 ST7LQ8TDW4 575 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 PROX1Q92786 737 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 NEUROG1Q92886 237 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 ADGRG7Q96K78 797 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 CCDC42Q96M95 316 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 IWS1Q96ST2 819 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 NEURL2Q9BR09 285 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 LXNQ9BS40 222 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 ZNF350Q9GZX5 532 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 DNAJC17Q9NVM6 304 aaKnown RBP3.74□□□□□ -1.81
SMCO3-201ENST00000316048 RIPK3Q9Y572 518 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 NME7Q9Y5B8 376 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 DOCK1Q14185 1865 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 UBE4BO95155 1302 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 MED19A0JLT2 244 aaPredicted RBP3.74□□□□□ -1.81
SMCO3-201ENST00000316048 CTAGE9A4FU28 777 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 ASPDHA6ND91 283 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 CXCL11O14625 94 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 TTI1O43156 1089 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 KRT86O43790 486 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 ATP6AP2O75787 350 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 CTAGE8P0CG41 777 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 CCND3P30281 292 aaPredicted RBP3.74□□□□□ -1.81
SMCO3-201ENST00000316048 YWHABP31946 246 aaKnown RBP3.74□□□□□ -1.81
SMCO3-201ENST00000316048 SERPINB6P35237 376 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 USP8P40818 1118 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 CLDN15P56746 228 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 LINC00205P59089 165 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 BPIFB3P59826 476 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 SNRPFP62306 86 aaKnown RBP3.74□□□□□ -1.81
SMCO3-201ENST00000316048 TUBA1BP68363 451 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 VGLL4Q14135 290 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 MTF1Q14872 753 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 NPTX1Q15818 432 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 STXBP2Q15833 593 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 PTGISQ16647 500 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 CDO1Q16878 200 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 UGT3A2Q3SY77 523 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 ZNF260Q3ZCT1 412 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 TRNP1Q6NT89 227 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 FAM122CQ6P4D5 195 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 TRIM65Q6PJ69 517 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 PLEKHM3Q6ZWE6 761 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 SLC9B2Q86UD5 537 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 KMT5CQ86Y97 462 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 ERO1BQ86YB8 467 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 CTAGE4Q8IX94 777 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 AQP12AQ8IXF9 295 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 ZC3H3Q8IXZ2 948 aaKnown RBP3.74□□□□□ -1.81
SMCO3-201ENST00000316048 FBXL14Q8N1E6 418 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 OR8H1Q8NGG4 311 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 B4GALNT2Q8NHY0 566 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 IRGQQ8WZA9 623 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 CDCA5Q96FF9 252 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 HMCESQ96FZ2 354 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 FAM71F1Q96KD3 344 aaPredicted RBP3.74□□□□□ -1.81
SMCO3-201ENST00000316048 KLHL5Q96PQ7 755 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 HAUS4Q9H6D7 363 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 LZTFL1Q9NQ48 299 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 AGPAT5Q9NUQ2 364 aa3.74□□□□□ -1.81
SMCO3-201ENST00000316048 CGNQ9P2M7 1197 aaKnown RBP3.74□□□□□ -1.81
SMCO3-201ENST00000316048 RNF7Q9UBF6 113 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms