RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 NRP1O14786 923 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 ZBTB48P10074 688 aaPredicted RBP20.24■□□□□ 0.83
KDM3B-201ENST00000314358 CRHR2Q13324 411 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 TBRG1Q3YBR2 411 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 LIPKQ5VXJ0 399 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 TMEM110Q86TL2 294 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 TICAM1Q8IUC6 712 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 SAMD12Q8N8I0 201 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 RDH12Q96NR8 316 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 EPYCQ99645 322 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 TREX2Q9BQ50 279 aaPredicted RBP20.24■□□□□ 0.83
KDM3B-201ENST00000314358 PIGVQ9NUD9 493 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 MAFBQ9Y5Q3 323 aaPredicted RBP20.24■□□□□ 0.83
KDM3B-201ENST00000314358 RICTORQ6R327 1708 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 EEFSECP57772 596 aaKnown RBP20.24■□□□□ 0.83
KDM3B-201ENST00000314358 ATAD3CQ5T2N8 411 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 RAB11FIP5Q9BXF6 653 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 MYEF2Q9P2K5 600 aaKnown RBP20.24■□□□□ 0.83
KDM3B-201ENST00000314358 MANBAO00462 879 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 CPNE6O95741 557 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 AHSGP02765 367 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 FHP07954 510 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 TTLQ8NG68 377 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 C1orf21Q9H246 121 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 ST3GAL3Q11203 375 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 PPP1R3AQ16821 1122 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.24■□□□□ 0.837e-7■□□□□ 8.4
KDM3B-201ENST00000314358 TDRPQ86YL5 185 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 TMEM151AQ8N4L1 468 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 CAMKVQ8NCB2 501 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 SLC22A17Q8WUG5 538 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 CMKLR1Q99788 373 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 C17orf62Q9BQA9 187 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 TMEM109Q9BVC6 243 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.24■□□□□ 0.832e-7■□□□□ 11.1
KDM3B-201ENST00000314358 DLX3O60479 287 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 POLR2CP19387 275 aaPredicted RBP20.24■□□□□ 0.83
KDM3B-201ENST00000314358 HTR7P34969 479 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 POT1Q9NUX5 634 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 PCDHB11Q9Y5F2 797 aa20.24■□□□□ 0.83
KDM3B-201ENST00000314358 TEX13CA0A0J9YWL9 993 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 CD8B2A6NJW9 211 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 SNHG28P0DPA3 235 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 CD8BP10966 210 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 FBXL22Q6P050 247 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 C11orf49Q9H6J7 331 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 GRXCR2A6NFK2 248 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 TGFBIQ15582 683 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 LBX2Q6XYB7 198 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 NAT8LQ8N9F0 302 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 MOCOSQ96EN8 888 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 CPNE2Q96FN4 548 aaPredicted RBP20.23■□□□□ 0.83
KDM3B-201ENST00000314358 EXTL2Q9UBQ6 330 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 EDARQ9UNE0 448 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 HSD17B2P37059 387 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 GAS6Q14393 721 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 MED1Q15648 1581 aaPredicted RBP20.23■□□□□ 0.83
KDM3B-201ENST00000314358 CHRFAM7AQ494W8 412 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 PRRT3Q5FWE3 981 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 C9orf43Q8TAL5 461 aaPredicted RBP20.23■□□□□ 0.83
KDM3B-201ENST00000314358 FCAMRQ8WWV6 532 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 NIFKQ9BYG3 293 aaKnown RBP20.23■□□□□ 0.83
KDM3B-201ENST00000314358 SOWAHBA6NEL2 793 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 RP2O75695 350 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 SLC16A9Q7RTY1 509 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 REM2Q8IYK8 340 aaPredicted RBP20.23■□□□□ 0.83
KDM3B-201ENST00000314358 CMTM8Q8IZV2 173 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 SSX3Q99909 188 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 DPY19L1Q2PZI1 675 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 ZDHHC24Q6UX98 284 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 SLC22A18Q96BI1 424 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 FBXL18Q96ME1 805 aa20.23■□□□□ 0.83
KDM3B-201ENST00000314358 SLC36A4Q6YBV0 504 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 POLDIP3Q9BY77 421 aaKnown RBP20.22■□□□□ 0.83
KDM3B-201ENST00000314358 TM9SF3Q9HD45 589 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 KAT6AQ92794 2004 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 SCO2O43819 266 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 GSTM3P21266 225 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 CYBRD1Q53TN4 286 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 TMEM126BQ8IUX1 230 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 CCDC116Q8IYX3 515 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 MKLN1Q9UL63 735 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 MRPS17Q9Y2R5 130 aaKnown RBP20.22■□□□□ 0.83
KDM3B-201ENST00000314358 M0R233 179 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 CD72P21854 359 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 DCAF12L1Q5VU92 463 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 GTF2IRD2BQ6EKJ0 949 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 GTF2IRD2Q86UP8 949 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 WDR20Q8TBZ3 569 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 COQ3Q9NZJ6 369 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 ZNF225Q9UK10 706 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 DUSP11O75319 330 aaKnown RBP20.22■□□□□ 0.83
KDM3B-201ENST00000314358 NIPAL4Q0D2K0 466 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 TMEM164Q5U3C3 297 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 EIF5AL1Q6IS14 154 aaKnown RBP20.22■□□□□ 0.83
KDM3B-201ENST00000314358 KLHL15Q96M94 604 aa20.22■□□□□ 0.83
KDM3B-201ENST00000314358 SSU72Q9NP77 194 aaKnown RBP20.22■□□□□ 0.83
KDM3B-201ENST00000314358 EIF2B3Q9NR50 452 aaKnown RBP20.22■□□□□ 0.83
KDM3B-201ENST00000314358 ZFR2Q9UPR6 939 aaKnown RBP20.22■□□□□ 0.83
KDM3B-201ENST00000314358 AQP12BA6NM10 295 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms