RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CLDN16Q9Y5I7 305 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 ZNF462Q96JM2 2506 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 CCDC189A1A4V9 331 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 TXNDC9O14530 226 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 MAN1A2O60476 641 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 SMIM24O75264 130 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 CDH16O75309 829 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 EEDO75530 441 aaKnown RBP11.35□□□□□ -0.59
SCFD1-201ENST00000311943 SERPINB3P29508 390 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 CASP2P42575 452 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 RHAGQ02094 409 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 TBCCQ15814 346 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 ADPRMQ3LIE5 342 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 NADK2Q4G0N4 442 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 FCRLBQ6BAA4 426 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 OR4N5Q8IXE1 308 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 CCNYL1Q8N7R7 359 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 CDYL2Q8N8U2 506 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 ARMC2Q8NEN0 867 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 MVB12AQ96EY5 273 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 MAGEB10Q96LZ2 347 aaPredicted RBP11.35□□□□□ -0.59
SCFD1-201ENST00000311943 MAPKAP1Q9BPZ7 522 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 WDR77Q9BQA1 342 aaPredicted RBP11.35□□□□□ -0.59
SCFD1-201ENST00000311943 EFCAB11Q9BUY7 163 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 ZNF717Q9BY31 904 aaPredicted RBP11.35□□□□□ -0.59
SCFD1-201ENST00000311943 GSTO2Q9H4Y5 243 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 MKKSQ9NPJ1 570 aaPredicted RBP11.35□□□□□ -0.59
SCFD1-201ENST00000311943 CDC14AQ9UNH5 594 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 PTGDR2Q9Y5Y4 395 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 STX16-NPEPL1H3BU86 382 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 PLPP1O14494 284 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 STX16O14662 325 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 CLEC3AO75596 197 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 ARRB2P32121 409 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 NAGLUP54802 743 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 CLCQ05315 142 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 SLC18A2Q05940 514 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 ABRAXAS2Q15018 415 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 HERC3Q15034 1050 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 PCOLCEQ15113 449 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 FAM180BQ6P0A1 224 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 ZCCHC23Q6ZST2 131 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 CCDC91Q7Z6B0 441 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 C10orf107Q8IVU9 208 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 APLFQ8IW19 511 aaPredicted RBP11.34□□□□□ -0.59
SCFD1-201ENST00000311943 MMP21Q8N119 569 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 BANPQ8N9N5 519 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 OR2L5Q8NG80 312 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.34□□□□□ -0.59
SCFD1-201ENST00000311943 CATSPER2Q96P56 530 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 MRPL1Q9BYD6 325 aaKnown RBP11.34□□□□□ -0.59
SCFD1-201ENST00000311943 TGIF2Q9GZN2 237 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 SLC25A18Q9H1K4 315 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 ZNF552Q9H707 407 aaPredicted RBP11.34□□□□□ -0.59
SCFD1-201ENST00000311943 DMRT3Q9NQL9 472 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 COL12A1Q99715 3063 aa11.34□□□□□ -0.59
SCFD1-201ENST00000311943 IGHV1-45A0A0A0MS14 117 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 GLOD5A6NK44 160 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 TMPRSS11DO60235 418 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 LDB3O75112 727 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 CLDN9O95484 217 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 PIM1P11309 404 aaPredicted RBP11.33□□□□□ -0.6
SCFD1-201ENST00000311943 PTGER1P34995 402 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 CCNG1P51959 295 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 HERVK_113P63132 956 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 MPP2Q14168 576 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 PCLAFQ15004 111 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 C18orf63Q68DL7 685 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 ABHD13Q7L211 337 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 MILR1Q7Z6M3 343 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 RAB43Q86YS6 212 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 IQCKQ8N0W5 287 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 KIF2BQ8N4N8 673 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 SIRT6Q8N6T7 355 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 L3MBTL4Q8NA19 623 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 PSMF1Q92530 271 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 TBC1D20Q96BZ9 403 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 FAM111AQ96PZ2 611 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 ERVK-6Q9BXR3 956 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 CAPS2Q9BXY5 557 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 CENPHQ9H3R5 247 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 NT5DC2Q9H857 520 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 ZNF395Q9H8N7 513 aaPredicted RBP11.33□□□□□ -0.6
SCFD1-201ENST00000311943 MLXIPLQ9NP71 852 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 KCMF1Q9P0J7 381 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 FBXW2Q9UKT8 454 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 PRRC2CQ9Y520 2896 aaKnown RBP11.33□□□□□ -0.6
SCFD1-201ENST00000311943 NUP210LQ5VU65 1888 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 COPEO14579 308 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 PRKNO60260 465 aaPredicted RBP11.33□□□□□ -0.6
SCFD1-201ENST00000311943 GLRA3O75311 464 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 PDYNP01213 254 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 FHP07954 510 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 C8orf89P0DMQ9 161 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 ATP5F1P24539 256 aaPredicted RBP11.33□□□□□ -0.6
SCFD1-201ENST00000311943 CXCR2P25025 360 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 ITGA3P26006 1051 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 CRHR1P34998 444 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 PRKAA2P54646 552 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 LIM2P55344 173 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms