RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 SF1Q15637 639 aaKnown RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 TMEM126BQ8IUX1 230 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 FGF13Q92913 245 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 ZBTB26Q9HCK0 441 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 TRIM36Q9NQ86 728 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 FBXW11Q9UKB1 542 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 FBXW2Q9UKT8 454 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 LRRN3E7EW58 273 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 M0R2N6 131 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 TMEM63AO94886 807 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 DIRAS1O95057 198 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 STBD1O95210 358 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 FARS2O95363 451 aaKnown RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 MT-CYBP00156 380 aaPredicted RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 PABPC4LP0CB38 370 aaKnown RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 ZNF20P17024 532 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 ZNF3P17036 446 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 HNF1BP35680 557 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 MAP2K3P46734 347 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 NDST2P52849 883 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 FOXM1Q08050 763 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 RIPPLY1Q0D2K3 151 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 ALG1LQ6GMV1 187 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 COMTD1Q86VU5 262 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 ZNF675Q8TD23 568 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 CASTOR1Q8WTX7 329 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 DHRS1Q96LJ7 313 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 LRRN3Q9H3W5 708 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 ABI3Q9P2A4 366 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 SH2B3Q9UQQ2 575 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 MRPS33Q9Y291 106 aaKnown RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 PCDHGB1Q9Y5G3 927 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 STYXL1Q9Y6J8 313 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 FUOMA2VDF0 154 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 RPP14O95059 124 aaKnown RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 HMGN1P05114 100 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 ALPIP09923 528 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 PRKCHP24723 683 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 LMO2P25791 158 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 L1CAMP32004 1257 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 SPAM1P38567 509 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 SMSP52788 366 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 SLC18A1P54219 525 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 GPX6P59796 221 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 MRPS21P82921 87 aaKnown RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 MSANTD2Q6P1R3 559 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 VTCN1Q7Z7D3 282 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 OR8S1Q8NH09 359 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 S100A16Q96FQ6 103 aaKnown RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 MAPKAP1Q9BPZ7 522 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 NDC1Q9BTX1 674 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 ASPNQ9BXN1 380 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 UCK2Q9BZX2 261 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 ZBP1Q9H171 429 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 DPEP2Q9H4A9 486 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 TPT1P8Q9HAU6 139 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 NMUR1Q9HB89 426 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 CXXC1Q9P0U4 656 aaPredicted RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 WRAP73Q9P2S5 460 aaPredicted RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 EXTL2Q9UBQ6 330 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 RUVBL1Q9Y265 456 aaKnown RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 CXorf49A8MYA2 514 aaPredicted RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 CLIC1O00299 241 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 PCDHGA12O60330 932 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 CHRM1P11229 460 aaPredicted RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 FAM189BP81408 668 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 CCINQ13939 588 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 SEC23BQ15437 767 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 KIAA1614Q5VZ46 1190 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 LYSMD4Q5XG99 296 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 ZNF227Q86WZ6 799 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 METTL25Q8N6Q8 603 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 AQP11Q8NBQ7 271 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 OR10Q1Q8NGQ4 319 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 TMEM40Q8WWA1 233 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 DEDD2Q8WXF8 326 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 RAB7BQ96AH8 199 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 C7orf34Q96L11 122 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 MUS81Q96NY9 551 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 EIF5A2Q9GZV4 153 aaKnown RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 ADAMTS6Q9UKP5 1117 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 TCRBV7S3A2A0A539 114 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 RAB36O95755 333 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 RENP00797 406 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 CHRNB2P17787 502 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 DGKQP52824 942 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 HADHBP55084 474 aaKnown RBP7.9□□□□□ -1.14
VPS41-202ENST00000310301 ALKBH2Q6NS38 261 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 PLEKHG7Q6ZR37 379 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 CHERPQ8IWX8 916 aaKnown RBP7.9□□□□□ -1.14
VPS41-202ENST00000310301 NAT8LQ8N9F0 302 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 OR6C4Q8NGE1 309 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 GEMIN6Q8WXD5 167 aaKnown RBP7.9□□□□□ -1.14
VPS41-202ENST00000310301 ASB15Q8WXK1 588 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 TMEM74Q96NL1 305 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 PKP4Q99569 1192 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 C7orf50Q9BRJ6 194 aaKnown RBP7.9□□□□□ -1.14
VPS41-202ENST00000310301 FAM83DQ9H4H8 585 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 C14orf166Q9Y224 244 aaKnown RBP7.9□□□□□ -1.14
VPS41-202ENST00000310301 HEBP2Q9Y5Z4 205 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms