RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 TEAD4Q15561 434 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 PRSS53Q2L4Q9 553 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 GTF2IRD2BQ6EKJ0 949 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 FAM109BQ6ICB4 259 aaPredicted RBP11.05□□□□□ -0.64
PTPN2-201ENST00000309660 GTF2IRD2Q86UP8 949 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 RASGRP3Q8IV61 690 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 TAGAPQ8N103 731 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 TAMM41Q96BW9 452 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 COQ8BQ96D53 544 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 C7orf34Q96L11 122 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 DOK1Q99704 481 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 NDUFAF4Q9P032 175 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 NFKBIL1Q9UBC1 381 aaPredicted RBP11.05□□□□□ -0.64
PTPN2-201ENST00000309660 CDH7Q9ULB5 785 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 KIAA1671Q9BY89 1806 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 TRPM6Q9BX84 2022 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 C5orf58C9J3I9 102 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 GCM2O75603 506 aaPredicted RBP11.05□□□□□ -0.64
PTPN2-201ENST00000309660 HNRNPCP07910 306 aaKnown RBP eCLIP11.05□□□□□ -0.64
PTPN2-201ENST00000309660 ITGAMP11215 1152 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 JUNBP17275 347 aaPredicted RBP11.05□□□□□ -0.64
PTPN2-201ENST00000309660 MANFP55145 182 aaKnown RBP11.05□□□□□ -0.64
PTPN2-201ENST00000309660 ZNF33BQ06732 778 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 TP53BP2Q13625 1128 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 NR1D2Q14995 579 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 IFI44LQ53G44 452 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 C7orf61Q8IZ16 206 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 NLGN4XQ8N0W4 816 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 LGI4Q8N135 537 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 TMCO5AQ8N6Q1 288 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 OR2L2Q8NH16 312 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 FAR1Q8WVX9 515 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 PROX1Q92786 737 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 MUL1Q969V5 352 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 SGPP1Q9BX95 441 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 BHLHE41Q9C0J9 482 aaPredicted RBP11.05□□□□□ -0.64
PTPN2-201ENST00000309660 PCDHGA10Q9Y5H3 936 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 CORINQ9Y5Q5 1042 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 C1QTNF3-AMACRE9PGA6 284 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 HOXC11O43248 304 aaPredicted RBP11.04□□□□□ -0.64
PTPN2-201ENST00000309660 PCGF2P35227 344 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 TGFBR1P36897 503 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 MAPK9P45984 424 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 GABARAPL2P60520 117 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 GRSF1Q12849 480 aaKnown RBP eCLIP11.04□□□□□ -0.64
PTPN2-201ENST00000309660 TUBA3CQ13748 450 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 MAD2L1BPQ15013 274 aaPredicted RBP11.04□□□□□ -0.64
PTPN2-201ENST00000309660 EXOC3L2Q2M3D2 409 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 SLCO6A1Q86UG4 719 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 SNX29P2Q8IUI4 249 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 CCDC71Q8IV32 467 aaPredicted RBP11.04□□□□□ -0.64
PTPN2-201ENST00000309660 ETFBKMTQ8IXQ9 262 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 KRT78Q8N1N4 520 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 RPL3LQ92901 407 aaKnown RBP11.04□□□□□ -0.64
PTPN2-201ENST00000309660 NLNQ9BYT8 704 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 DOLKQ9UPQ8 538 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 KCNK6Q9Y257 313 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 SERTM1A2A2V5 107 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 GLOD5A6NK44 160 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 FAM227AF5H4B4 570 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 PPM1DO15297 605 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 MID1O15344 667 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 OR1F1O43749 312 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 GPR37L1O60883 481 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 JRKO75564 520 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 BCHEP06276 602 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 SLC35G4P0C7Q5 338 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 ALPPL2P10696 532 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 C21orf33P30042 268 aaPredicted RBP11.04□□□□□ -0.64
PTPN2-201ENST00000309660 MAT2AP31153 395 aaKnown RBP11.04□□□□□ -0.64
PTPN2-201ENST00000309660 SLC19A1P41440 591 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 NCS1P62166 190 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 IL18R1Q13478 541 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 UAP1L1Q3KQV9 507 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 BCL7AQ4VC05 210 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 EGFLAMQ63HQ2 1017 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 CEACAM20Q6UY09 585 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 VANGL1Q8TAA9 524 aaPredicted RBP11.04□□□□□ -0.64
PTPN2-201ENST00000309660 NDNFQ8TB73 568 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 FNDC8Q8TC99 324 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 BORCS5Q969J3 196 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 PLEKHA8Q96JA3 519 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 ZNF514Q96K75 400 aaPredicted RBP11.04□□□□□ -0.64
PTPN2-201ENST00000309660 IMPAD1Q9NX62 359 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 WASHC1A8K0Z3 465 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 CLPXO76031 633 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 RB1P06400 928 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 KELP23276 732 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 MASP1P48740 699 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 ST13P50502 369 aaKnown RBP11.04□□□□□ -0.64
PTPN2-201ENST00000309660 PRKAG1P54619 331 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 SEC13P55735 322 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 ZC3H12BQ5HYM0 836 aaKnown RBP11.04□□□□□ -0.64
PTPN2-201ENST00000309660 TMEM236Q5W0B7 351 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 PSRC1Q6PGN9 363 aaPredicted RBP11.04□□□□□ -0.64
PTPN2-201ENST00000309660 WASH2PQ6VEQ5 465 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 OR52N2Q8NGI0 321 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 SMARCD2Q92925 531 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 FERD3LQ96RJ6 166 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 NIPSNAP1Q9BPW8 284 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms