RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 BLVRAP53004 296 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 NKG7Q16617 165 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 CARD16Q5EG05 197 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 XAF1Q6GPH4 301 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 C22orf39Q6P5X5 142 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 FAM124AQ86V42 546 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 FYTTD1Q96QD9 318 aaKnown RBP12.19□□□□□ -0.46
RETREG3-201ENST00000309428 CLEC4MQ9H2X3 399 aaPredicted RBP12.19□□□□□ -0.46
RETREG3-201ENST00000309428 SERHL2Q9H4I8 314 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 TPT1P8Q9HAU6 139 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 SERHLQ9NQF3 203 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 CFL2Q9Y281 166 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 ASF1AQ9Y294 204 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 ISPDA4D126 451 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 E7EQ34 232 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 FKTNO75072 461 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 CH25HO95992 272 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 SOD2P04179 222 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 ACPPP15309 386 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 CYP2A7P20853 494 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 RPS3P23396 243 aaKnown RBP eCLIP12.18□□□□□ -0.463e-7■■■□□ 15.9
RETREG3-201ENST00000309428 ACRV1P26436 265 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 KDELR2P33947 212 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 TIE1P35590 1138 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 HNRNPA0Q13151 305 aaKnown RBP12.18□□□□□ -0.46
RETREG3-201ENST00000309428 EIF4EBP2Q13542 120 aaPredicted RBP12.18□□□□□ -0.46
RETREG3-201ENST00000309428 ZMYND11Q15326 602 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 CLEC12AQ5QGZ9 265 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 HSD11B1LQ7Z5J1 315 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 LYSMD2Q8IV50 215 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 ZNF614Q8N883 585 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 C11orf65Q8NCR3 313 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 NARS2Q96I59 477 aaKnown RBP12.18□□□□□ -0.46
RETREG3-201ENST00000309428 CHIAQ9BZP6 476 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 SMLR1H3BR10 107 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 WWP2O00308 870 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 MMP20O60882 483 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 FGF4P08620 206 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 PIM1P11309 404 aaPredicted RBP12.18□□□□□ -0.46
RETREG3-201ENST00000309428 RAB8AP61006 207 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 TCEAL5Q5H9L2 206 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 C10orf62Q5T681 223 aaPredicted RBP12.18□□□□□ -0.46
RETREG3-201ENST00000309428 SLC5A8Q8N695 610 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 PIK3R3Q92569 461 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 FOPNLQ96NB1 174 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 NEDD4LQ96PU5 975 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 ZNF382Q96SR6 550 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 CCM2Q9BSQ5 444 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 ALOXE3Q9BYJ1 711 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 PTGFRNQ9P2B2 879 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 MRPS23Q9Y3D9 190 aaKnown RBP12.18□□□□□ -0.46
RETREG3-201ENST00000309428 SSNA1O43805 119 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 GADD45GO95257 159 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 CCL5P13501 91 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 MYL9P24844 172 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 UQCRC1P31930 480 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 NSG1P42857 185 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 WSCD2Q2TBF2 565 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 AQP11Q8NBQ7 271 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 ZNF740Q8NDX6 193 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 DNASE1L2Q92874 299 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 RHBDF1Q96CC6 855 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 TBX5Q99593 518 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 NTN4Q9HB63 628 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 CPNE5Q9HCH3 593 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 NLKQ9UBE8 527 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 PCDHGB3Q9Y5G1 929 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 N6AMT1Q9Y5N5 214 aa12.18□□□□□ -0.46
RETREG3-201ENST00000309428 TRAV6A0A075B6T7 132 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 CCNDBP1O95273 360 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 SLC16A8O95907 504 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 LAMP1P11279 417 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 CR2P20023 1033 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 CCR2P41597 374 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 TGM4P49221 684 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 CAV3P56539 151 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 ISL1P61371 349 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 AP1S1P61966 158 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 VLDLRP98155 873 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 SLC14A1Q13336 389 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 IQCCQ4KMZ1 466 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 DCAF4L2Q8NA75 395 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 XAGE5Q8WWM1 108 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 SNAPC3Q92966 411 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 ZFP3Q96NJ6 502 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 KCTD5Q9NXV2 234 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 ABCD2Q9UBJ2 740 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 SCN2AQ99250 2005 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 PRAMEF33A0A0G2JMD5 474 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 NUPL2O15504 423 aaKnown RBP12.17□□□□□ -0.46
RETREG3-201ENST00000309428 PRAMEF10O60809 474 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 SLITRK5O94991 958 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 NR2F6P10588 404 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 GPR1P46091 355 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 FCHO2Q0JRZ9 810 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 ABHD18Q0P651 414 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 GRSF1Q12849 480 aaKnown RBP eCLIP12.17□□□□□ -0.469e-9■■■□□ 17.6
RETREG3-201ENST00000309428 ANGPT1Q15389 498 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 ATAD3CQ5T2N8 411 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 C22orf42Q6IC83 251 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms