RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 TBCCQ15814 346 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 PDK4Q16654 411 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 MROH9Q5TGP6 573 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 FCRLBQ6BAA4 426 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 LRRC70Q7Z2Q7 622 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 UBE3DQ7Z6J8 389 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 ST6GALNAC3Q8NDV1 305 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 NFAM1Q8NET5 270 aaPredicted RBP18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 TTLQ8NG68 377 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 ELP5Q8TE02 316 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 ISL2Q96A47 359 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 CDC42EP4Q9H3Q1 356 aaKnown RBP18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 NMRAL1Q9HBL8 299 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 SNX15Q9NRS6 342 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 TRAV17A0A0B4J275 112 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 DYTNA2CJ06 578 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 OR5H15A6NDH6 313 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 URADA6NGE7 173 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 KLK8O60259 260 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 RNH1P13489 461 aaKnown RBP18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 MAOAP21397 527 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 JAK1P23458 1154 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 AP2B1P63010 937 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 EXT1Q16394 746 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 ABHD17CQ6PCB6 329 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 RAPH1Q70E73 1250 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 CRLF3Q8IUI8 442 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 SCUBE1Q8IWY4 988 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 BEST3Q8N1M1 668 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 OR2L5Q8NG80 312 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 RHEBL1Q8TAI7 183 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 EXT2Q93063 718 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 PTCD3Q96EY7 689 aaKnown RBP18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 PTCHD1Q96NR3 888 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 LPAR4Q99677 370 aa18.59■□□□□ 0.57
PDZRN3-202ENST00000308537 ERI3O43414 337 aaKnown RBP18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 PRMT3O60678 531 aa18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 H2AFYO75367 372 aaKnown RBP18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 AGFG2O95081 481 aa18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 OR4D2P58180 307 aa18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 STXBP1P61764 594 aaKnown RBP18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 BTN3A2P78410 334 aa18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 ZNF33BQ06732 778 aa18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 CHIT1Q13231 466 aa18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 XKR6Q5GH73 641 aa18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 ACER2Q5QJU3 275 aa18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 TBC1D1Q86TI0 1168 aaPredicted RBP18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 KRT78Q8N1N4 520 aa18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 PLD6Q8N2A8 252 aaKnown RBP18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 KIF2BQ8N4N8 673 aa18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 SNX31Q8N9S9 440 aa18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 PRR7Q8TB68 274 aa18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 ZNF473Q8WTR7 871 aaKnown RBP18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 SSC4DQ8WTU2 575 aa18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 MRRFQ96E11 262 aaKnown RBP18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 EFCAB11Q9BUY7 163 aa18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 NPLQ9BXD5 320 aaPredicted RBP18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 PRDM7Q9NQW5 492 aa18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 AGPAT4Q9NRZ5 378 aa18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 STMN3Q9NZ72 180 aa18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 ACOT9Q9Y305 439 aa18.58■□□□□ 0.56
PDZRN3-202ENST00000308537 A8MUI8 341 aa18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 CLGNO14967 610 aa18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 CCNT2O60583 730 aaKnown RBP18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 WISP2O76076 250 aa18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 LDLRP01130 860 aa18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 EDN3P14138 238 aa18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 ST13P50502 369 aaKnown RBP18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 NAA30Q147X3 362 aaPredicted RBP18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 INAQ16352 499 aa18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 ABHD17BQ5VST6 288 aa18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 ZNF793Q6ZN11 406 aa18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 LAS2Q8IYD9 372 aa18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 ARMC10Q8N2F6 343 aa18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 MDS2Q8NDY4 140 aa18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 SLC44A1Q8WWI5 657 aa18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 CSF3RQ99062 836 aa18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 MS4A8Q9BY19 250 aa18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 REXO4Q9GZR2 422 aaKnown RBP18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 KCNK13Q9HB14 408 aa18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 PRDM9Q9NQV7 894 aa18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 CROCCQ5TZA2 2017 aa18.57■□□□□ 0.56
PDZRN3-202ENST00000308537 A0A087X1B8 175 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 A0A096LPK6 155 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 LRRC14BA6NHZ5 514 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 SAGE2PA6NJ88 616 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 K7EPI3 171 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 CYR61O00622 381 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 KLHL2O95198 593 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 GP1BBP13224 206 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 CERS1P27544 350 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 GPR143P51810 404 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 RAB38P57729 211 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 IRF8Q02556 426 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 TUBA3CQ13748 450 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 ZNF468Q5VIY5 522 aaPredicted RBP18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 TUBA3EQ6PEY2 450 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 CCDC91Q7Z6B0 441 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 ZNF227Q86WZ6 799 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 APCDD1LQ8NCL9 501 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms