RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 C1QTNF3Q9BXJ4 246 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 CTPS2Q9NRF8 586 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 MN1Q10571 1320 aaPredicted RBP12.55□□□□□ -0.4
TRIM35-201ENST00000305364 WEE1P30291 646 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 ATN1P54259 1190 aaPredicted RBP12.54□□□□□ -0.4
TRIM35-201ENST00000305364 CHRNA6Q15825 494 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 CCDC190Q86UF4 302 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 AKAP1Q92667 903 aaKnown RBP eCLIP12.54□□□□□ -0.4
TRIM35-201ENST00000305364 MAP6Q96JE9 813 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 RACGAP1Q9H0H5 632 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 SEMA3GQ9NS98 782 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 RLIMQ9NVW2 624 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 EIF3KQ9UBQ5 218 aaKnown RBP12.54□□□□□ -0.4
TRIM35-201ENST00000305364 RIMKLBQ9ULI2 386 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 SCML2Q9UQR0 700 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 NCKAP1Q9Y2A7 1128 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 UBR3Q6ZT12 1888 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 WASH4PA8MWX3 477 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 NFKBIEO00221 500 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 AKR7A2O43488 359 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 GPX5O75715 221 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 SERPIND1P05546 499 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 GPC1P35052 558 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 TIAL1Q01085 375 aaKnown RBP eCLIP12.54□□□□□ -0.4
TRIM35-201ENST00000305364 ACVR1Q04771 509 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 C2orf80Q0P641 193 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 RPA4Q13156 261 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 MICAQ29983 383 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 ANKRD54Q6NXT1 300 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 CXCL17Q6UXB2 119 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 ANKS3Q6ZW76 656 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 C11orf96Q7Z7L8 435 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 GALNT6Q8NCL4 622 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 PCNPQ8WW12 178 aaKnown RBP12.54□□□□□ -0.4
TRIM35-201ENST00000305364 SIPA1Q96FS4 1042 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 PRLP01236 227 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 HOXA9P31269 272 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 CDH4P55283 916 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 FKBP1BP68106 108 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 SETMARQ53H47 684 aaPredicted RBP12.54□□□□□ -0.4
TRIM35-201ENST00000305364 RETSATQ6NUM9 610 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 ZFP41Q8N8Y5 198 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 UFD1Q92890 307 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 TEFMQ96QE5 360 aaKnown RBP12.54□□□□□ -0.4
TRIM35-201ENST00000305364 OSER1Q9NX31 292 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 LOC102723532A0A0G2JNH3 316 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 ENTPD6O75354 484 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 CLDN7O95471 211 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 DUSP4Q13115 394 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 GPR50Q13585 617 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 LARS2Q15031 903 aaKnown RBP12.54□□□□□ -0.4
TRIM35-201ENST00000305364 CXorf57Q6NSI4 855 aaKnown RBP12.54□□□□□ -0.4
TRIM35-201ENST00000305364 FAM171BQ6P995 826 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 LYPD8Q6UX82 237 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 AGMOQ6ZNB7 445 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 C10orf111Q8N326 155 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 OR6C4Q8NGE1 309 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 CLP1Q92989 425 aaKnown RBP12.54□□□□□ -0.4
TRIM35-201ENST00000305364 TMEM159Q96B96 161 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 HYLS1Q96M11 299 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 NELL2Q99435 816 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 GABARAPL1Q9H0R8 117 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 ELOVL2Q9NXB9 296 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 ALG5Q9Y673 324 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 LRRC37AA6NMS7 1700 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 LY75O60449 1722 aa12.54□□□□□ -0.4
TRIM35-201ENST00000305364 GSAPA4D1B5 854 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 SAP18O00422 153 aaKnown RBP12.53□□□□□ -0.4
TRIM35-201ENST00000305364 LYRM1O43325 122 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 NME6O75414 186 aaPredicted RBP12.53□□□□□ -0.4
TRIM35-201ENST00000305364 ZNF81P51508 661 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 SELENOWP63302 87 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 SLC14A1Q13336 389 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 FGFBP1Q14512 234 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 TNFAIP8L2Q6P589 184 aaPredicted RBP12.53□□□□□ -0.4
TRIM35-201ENST00000305364 PAWRQ96IZ0 340 aaKnown RBP12.53□□□□□ -0.4
TRIM35-201ENST00000305364 TMED9Q9BVK6 235 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 SPATA9Q9BWV2 254 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 BRD9Q9H8M2 597 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 RDH8Q9NYR8 311 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 GULP1Q9UBP9 304 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 FBXO9Q9UK97 447 aaPredicted RBP12.53□□□□□ -0.4
TRIM35-201ENST00000305364 PADI3Q9ULW8 664 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 A0A075B6Q4 140 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 GLTPD2A6NH11 291 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 B8ZZF3 427 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 J3KTA2 159 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 PCDH17O14917 1159 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 CAV3P56539 151 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 RPL6Q02878 288 aaKnown RBP12.53□□□□□ -0.4
TRIM35-201ENST00000305364 IDNKQ5T6J7 187 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 CHCHD4Q8N4Q1 142 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 TEX26Q8N6G2 289 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 DPCDQ9BVM2 203 aaPredicted RBP12.53□□□□□ -0.4
TRIM35-201ENST00000305364 FNDC11Q9BVV2 318 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 ACSL6Q9UKU0 697 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 SH3D21A4FU49 640 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 HOXA2O43364 376 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 KLK8O60259 260 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 TBL1XO60907 577 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms