RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 TCN1P20061 433 aaPredicted RBP17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 HIST1H1TP22492 207 aaPredicted RBP17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 TSFMP43897 325 aaKnown RBP17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 GPR3P46089 330 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 CCT8P50990 548 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 GFERP55789 205 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 OR1D5P58170 312 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 ARF3P61204 181 aaPredicted RBP17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 KLC1Q07866 573 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 RIPK1Q13546 671 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 RABL3Q5HYI8 236 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 SLC23A3Q6PIS1 610 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 OR8K5Q8NH50 307 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 OR4C6Q8NH72 309 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 TMEM125Q96AQ2 219 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 PPCDCQ96CD2 204 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 MTERF3Q96E29 417 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 RAB33BQ9H082 229 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 MIEF1Q9NQG6 463 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 ATAD3AQ9NVI7 634 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 VAPAQ9P0L0 249 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 CD300AQ9UGN4 299 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 PADI4Q9UM07 663 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 IGHV1OR21-1A0A087WYE8 117 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 A0A096LPI6 279 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 RFXANKO14593 260 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 MAP3K7O43318 606 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 SCN2BO60939 215 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 ERN1O75460 977 aaKnown RBP17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 CER1O95813 267 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 EIF2S1P05198 315 aaKnown RBP17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 MSX2P35548 267 aaPredicted RBP17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 ACTR3P61158 418 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 TRA2BP62995 288 aaKnown RBP17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 HEPACAMQ14CZ8 416 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 ZNF385BQ569K4 471 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 ZNF655Q8N720 491 aaPredicted RBP17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 ACOT4Q8N9L9 421 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 FAM156AQ8NDB6 213 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 VPS37AQ8NEZ2 397 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 ZDHHC12Q96GR4 267 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 CCDC3Q9BQI4 270 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 INPP5KQ9BT40 448 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 BHLHE41Q9C0J9 482 aaPredicted RBP17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 PAIP1Q9H074 479 aaKnown RBP17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 EPB41L1Q9H4G0 881 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 FAM60AQ9NP50 221 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 EPHA6Q9UF33 1036 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 NEUROG3Q9Y4Z2 214 aa17.61■□□□□ 0.41
SEC61A2-201ENST00000298428 VPS13AQ96RL7 3174 aa17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 TLCD2A6NGC4 264 aa17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 URADA6NGE7 173 aa17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 ARHGAP33O14559 1287 aa17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 KIF1CO43896 1103 aaKnown RBP17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 ATP6V1G2O95670 118 aa17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 ZNF888P0CJ79 500 aaPredicted RBP17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 DDCP20711 480 aa17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 ATP5A1P25705 553 aaKnown RBP17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 SLC9A5Q14940 896 aa17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 NR1D2Q14995 579 aa17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 LRIF1Q5T3J3 769 aa17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 ANXA8L1Q5VT79 327 aa17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 DGLUCYQ7Z3D6 616 aa17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 MMP21Q8N119 569 aa17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 ZCCHC7Q8N3Z6 543 aaKnown RBP17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 OR2I1PQ8NGU4 316 aa17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 ZCCHC10Q8TBK6 192 aa17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 UTP15Q8TED0 518 aaKnown RBP17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 MIEF2Q96C03 454 aa17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 ZMYND15Q9H091 742 aa17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 COPS7BQ9H9Q2 264 aaPredicted RBP17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 SUCOQ9UBS9 1254 aaKnown RBP17.6■□□□□ 0.41
SEC61A2-201ENST00000298428 ADAMTS9Q9P2N4 1935 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 PRSS51A0A1B0GVH4 220 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 FAM86C2PA6NEL3 165 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 DUX1O43812 170 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 ANP32DO95626 131 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 FAM58BPP0C7Q3 252 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 CERS1P27544 350 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 CDKN2CP42773 168 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 GPLD1P80108 840 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 SLAMF1Q13291 335 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 DEFB110Q30KQ9 67 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 AMZ1Q400G9 498 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 GTDC1Q4AE62 458 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 TICAM1Q8IUC6 712 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 MSRB3Q8IXL7 192 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 CLECL1Q8IZS7 167 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 Q8N9G6 341 aaPredicted RBP17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 OR8J3Q8NGG0 315 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 TCTN2Q96GX1 697 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 ANKRD27Q96NW4 1050 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 PANX1Q96RD7 426 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 CD180Q99467 661 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 SLC6A13Q9NSD5 602 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 TEX10Q9NXF1 929 aaPredicted RBP17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 SLC25A37Q9NYZ2 338 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 GMEB2Q9UKD1 530 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 PCDHB14Q9Y5E9 798 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms