RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 SOX14O95416 240 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 XPAP23025 273 aaPredicted RBP23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 VIPR1P32241 457 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 POLR2LP62875 67 aaKnown RBP23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 TBCEQ15813 527 aaPredicted RBP23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 DUSP7Q16829 419 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 ADIPOR2Q86V24 386 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 OR4C15Q8NGM1 316 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 POP5Q969H6 163 aaKnown RBP23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 PSD2Q9BQI7 771 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 EMILIN2Q9BXX0 1053 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 REEP4Q9H6H4 257 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 K7ESM1 405 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 PLK4O00444 970 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 UGDHO60701 494 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 C8AP07357 584 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 ALOX5P09917 674 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 TYRP14679 529 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 CDK6Q00534 326 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 LRRC74AQ0VAA2 488 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 PTGES3Q15185 160 aaKnown RBP23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 KCNJ8Q15842 424 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 HENMT1Q5T8I9 393 aaKnown RBP23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 BCDIN3DQ7Z5W3 292 aaKnown RBP23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 AQP11Q8NBQ7 271 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 C11orf16Q9NQ32 467 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 PCM1Q15154 2024 aa23.36■■□□□ 1.33
SPTSSA-201ENST00000298130 SERTM1A2A2V5 107 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 E9PQ18 207 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 KPNA5O15131 536 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 GASTP01350 101 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 RPLP0P05388 317 aaKnown RBP23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 RCVRNP35243 200 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 C10orf62Q5T681 223 aaPredicted RBP23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 CYP4Z2PQ8N1L4 340 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 BTN2A2Q8WVV5 523 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 AP2M1Q96CW1 435 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 C14orf119Q9NWQ9 140 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 RTCAO00442 366 aaKnown RBP23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 ALDH1A1P00352 501 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 RGS6P49758 472 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 TSTQ16762 297 aaKnown RBP23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 ZNF284Q2VY69 593 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 WDR53Q7Z5U6 358 aaPredicted RBP23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 HMGN2P46Q86SG4 172 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 METTL3Q86U44 580 aaKnown RBP23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 PPCDCQ96CD2 204 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 ABCG4Q9H172 646 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 ACER3Q9NUN7 267 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 IFT52Q9Y366 437 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 CTDSP2O14595 271 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 ATG13O75143 517 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 NPPBP16860 134 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 HOXD10P28358 340 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 ZNF763Q0D2J5 394 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 TEAD4Q15561 434 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 SPIN4Q56A73 249 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 LY6G5CQ5SRR4 150 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 TNFAIP8L2Q6P589 184 aaPredicted RBP23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 OR56A3Q8NH54 315 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 MMP27Q9H306 513 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 C1GALT1Q9NS00 363 aa23.35■■□□□ 1.33
SPTSSA-201ENST00000298130 H3BM21 787 aa23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 RNASET2O00584 256 aaKnown RBP23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 KLHL18O94889 574 aa23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 CKMT1AP12532 417 aa23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 GABRB1P18505 474 aa23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 DESI1Q6ICB0 168 aa23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 USP43Q70EL4 1123 aa23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 SLC7A5P1Q8MH63 180 aa23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 GLYATL1Q969I3 302 aa23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 ZNF556Q9HAH1 456 aa23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 HELZP42694 1942 aaKnown RBP23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 TRBC2A0A5B9 178 aa23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 CYP7B1O75881 506 aa23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 TRAPPC5Q8IUR0 188 aa23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 ATL1Q8WXF7 558 aa23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 ITPKCQ96DU7 683 aa23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 DEFB118Q96PH6 123 aa23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 BRF2Q9HAW0 419 aa23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 WNT6Q9Y6F9 365 aa23.34■■□□□ 1.33
SPTSSA-201ENST00000298130 SLC5A10A0PJK1 596 aa23.33■■□□□ 1.33
SPTSSA-201ENST00000298130 HTR3EA5X5Y0 456 aa23.33■■□□□ 1.33
SPTSSA-201ENST00000298130 GADD45GO95257 159 aa23.33■■□□□ 1.33
SPTSSA-201ENST00000298130 IL3P08700 152 aa23.33■■□□□ 1.33
SPTSSA-201ENST00000298130 FURINP09958 794 aa23.33■■□□□ 1.33
SPTSSA-201ENST00000298130 CNR2P34972 360 aa23.33■■□□□ 1.33
SPTSSA-201ENST00000298130 MADCAM1Q13477 382 aa23.33■■□□□ 1.33
SPTSSA-201ENST00000298130 C16orf78Q8WTQ4 265 aa23.33■■□□□ 1.33
SPTSSA-201ENST00000298130 MARCH7Q9H992 704 aa23.33■■□□□ 1.33
SPTSSA-201ENST00000298130 ERVK13-1Q9NX77 482 aa23.33■■□□□ 1.33
SPTSSA-201ENST00000298130 ANKMY1Q9P2S6 941 aa23.33■■□□□ 1.33
SPTSSA-201ENST00000298130 POFUT2Q9Y2G5 429 aa23.33■■□□□ 1.33
SPTSSA-201ENST00000298130 TSC22D4Q9Y3Q8 395 aa23.33■■□□□ 1.33
SPTSSA-201ENST00000298130 GPC6Q9Y625 555 aaPredicted RBP23.33■■□□□ 1.33
SPTSSA-201ENST00000298130 CHD7Q9P2D1 2997 aa23.33■■□□□ 1.33
SPTSSA-201ENST00000298130 KIAA0513O60268 411 aa23.33■■□□□ 1.32
SPTSSA-201ENST00000298130 CHRM5P08912 532 aaPredicted RBP23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms