RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 DOHHQ9BU89 302 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 SLC13A4Q9UKG4 626 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 PCDHB11Q9Y5F2 797 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 MYLKQ15746 1914 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 DICER1Q9UPY3 1922 aaKnown RBP12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 FAM25AB3EWG3 89 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 FAM25CB3EWG5 89 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 FAM25GB3EWG6 89 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 H3BNC9 293 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 PLOD3O60568 738 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 PRAMEF4O60810 478 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 GUCY1B2O75343 617 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 CYBAP13498 195 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 PSMA1P25786 263 aaKnown RBP12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 RGS6P49758 472 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 DSC1Q08554 894 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 PTGES3Q15185 160 aaKnown RBP12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 PRAMEF9Q5VWM5 478 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 RAB43Q86YS6 212 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 CHPFQ8IZ52 775 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 IPCEF1Q8WWN9 437 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 EFHD2Q96C19 240 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 PHOX2BQ99453 314 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 CPNE5Q9HCH3 593 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 ATP6V1HQ9UI12 483 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 M0R082 166 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 INPPL1O15357 1258 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 IFNW1P05000 195 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 CLEC2LP0C7M8 214 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 LHCGRP22888 699 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 NNMTP40261 264 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 CTSCP53634 463 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 LRIT3Q3SXY7 679 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 ERICH5Q6P6B1 374 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 SYCE2Q6PIF2 218 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 TMIGD1Q6UXZ0 262 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 PTOV1Q86YD1 416 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 MMAAQ8IVH4 418 aaKnown RBP12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 LAX1Q8IWV1 398 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 YIPF6Q96EC8 236 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 COL21A1Q96P44 957 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 TBX5Q99593 518 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 NTMT1Q9BV86 223 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 PRR14Q9BWN1 585 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 SEMA3GQ9NS98 782 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 TAS2R9Q9NYW1 312 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 COQ3Q9NZJ6 369 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 ASF1AQ9Y294 204 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 CCL27Q9Y4X3 112 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 PEX16Q9Y5Y5 336 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 CCDC182A6NF36 153 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 SLC28A2O43868 658 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 DNAJB5O75953 348 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 CASP3P42574 277 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 HNRNPA0Q13151 305 aaKnown RBP12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 CBX2Q14781 532 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 PAMR1Q6UXH9 720 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 CEACAM20Q6UY09 585 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 B3GLCTQ6Y288 498 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 CDK5RAP1Q96SZ6 601 aaKnown RBP12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 MARCH5Q9NX47 278 aa12.78□□□□□ -0.36
TNFRSF21-201ENST00000296861 PLXNA1Q9UIW2 1896 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 A0A1W2PRB8 838 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 FABP12A6NFH5 140 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 OR6C70A6NIJ9 312 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 UNCXA6NJT0 531 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 FADS2P1A8MWK0 482 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 ENTPD6O75354 484 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 PSKH1P11801 424 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 TNFSF8P32971 234 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 NRIP1P48552 1158 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 ELAVL2Q12926 359 aaKnown RBP12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 C1DQ13901 141 aaKnown RBP12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 SLC5A12Q1EHB4 618 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 CRTC2Q53ET0 693 aaPredicted RBP12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 ARSIQ5FYB1 569 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 TRIM46Q7Z4K8 759 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 RBM45Q8IUH3 476 aaKnown RBP12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 C19orf18Q8NEA5 215 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 WDR48Q8TAF3 677 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 COL26A1Q96A83 441 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 YME1L1Q96TA2 773 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 MACROD1Q9BQ69 325 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 PSD2Q9BQI7 771 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 CDADC1Q9BWV3 514 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 C1QTNF3Q9BXJ4 246 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 NLNQ9BYT8 704 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 HDHD2Q9H0R4 259 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 MAGIXQ9H6Y5 334 aa12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 MRPL17Q9NRX2 175 aaKnown RBP12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 NDRG4Q9ULP0 352 aaKnown RBP12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 YARS2Q9Y2Z4 477 aaKnown RBP12.77□□□□□ -0.36
TNFRSF21-201ENST00000296861 NYNRINQ9P2P1 1898 aaKnown RBP12.77□□□□□ -0.37
TNFRSF21-201ENST00000296861 ARHGEF33A8MVX0 844 aa12.77□□□□□ -0.37
TNFRSF21-201ENST00000296861 LZTS3O60299 673 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF21-201ENST00000296861 F11P03951 625 aa12.77□□□□□ -0.37
TNFRSF21-201ENST00000296861 HNRNPFP52597 415 aaKnown RBP12.77□□□□□ -0.37
TNFRSF21-201ENST00000296861 KRR1Q13601 381 aaKnown RBP12.77□□□□□ -0.37
TNFRSF21-201ENST00000296861 HIST2H2AA3Q6FI13 130 aa12.77□□□□□ -0.37
TNFRSF21-201ENST00000296861 ALG1LQ6GMV1 187 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms