RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 ZCCHC2Q9C0B9 1178 aaKnown RBP11.26□□□□□ -0.61
RHO-201ENST00000296271 REEP1Q9H902 201 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 SYNPO2LQ9H987 977 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 PREBQ9HCU5 417 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 KRT84Q9NSB2 600 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 KIF17Q9P2E2 1029 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 ATP6V1HQ9UI12 483 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 BAG5Q9UL15 447 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 AP3M1Q9Y2T2 418 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 GMPPBQ9Y5P6 360 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 OR52A4PA6NMU1 304 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 J3QRK9 145 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 RNASET2O00584 256 aaKnown RBP11.25□□□□□ -0.61
RHO-201ENST00000296271 PCDHGA12O60330 932 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 ALPPL2P10696 532 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 IL1RNP18510 177 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 FPR1P21462 350 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 MASP1P48740 699 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 RAD23AP54725 363 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 C21orf58P58505 322 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 PCDH1Q08174 1060 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 NFATC3Q12968 1075 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 DGCR6Q14129 220 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 UAP1L1Q3KQV9 507 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 AGBL4Q5VU57 503 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 TNFAIP8L2Q6P589 184 aaPredicted RBP11.25□□□□□ -0.61
RHO-201ENST00000296271 SLC16A12Q6ZSM3 486 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 PDZD3Q86UT5 571 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 METTL4Q8N3J2 472 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 VPS37AQ8NEZ2 397 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 OR9Q2Q8NGE9 314 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 TBC1D15Q8TC07 691 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 FGF14Q92915 247 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 RAB8BQ92930 207 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 FKBP10Q96AY3 582 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 WDR34Q96EX3 536 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 NODALQ96S42 347 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 FEVQ99581 238 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 NIPSNAP1Q9BPW8 284 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 MENTQ9BUN1 341 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 YTHDF1Q9BYJ9 559 aaKnown RBP11.25□□□□□ -0.61
RHO-201ENST00000296271 PBX4Q9BYU1 374 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 ARMC7Q9H6L4 198 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 LHX9Q9NQ69 397 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 C1GALT1Q9NS00 363 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 SELENONQ9NZV5 590 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 MOSPD1Q9UJG1 213 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 RPS6KA6Q9UK32 745 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 ZFR2Q9UPR6 939 aaKnown RBP11.25□□□□□ -0.61
RHO-201ENST00000296271 A0A1W2PPV9 198 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 GLOD5A6NK44 160 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 FOXE1O00358 373 aaPredicted RBP11.25□□□□□ -0.61
RHO-201ENST00000296271 NARSO43776 548 aaKnown RBP11.25□□□□□ -0.61
RHO-201ENST00000296271 GSTM2P28161 218 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 TIE1P35590 1138 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 CHI3L1P36222 383 aaPredicted RBP11.25□□□□□ -0.61
RHO-201ENST00000296271 CDH12P55289 794 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 ITGA1P56199 1179 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 RPP38P78345 283 aaKnown RBP11.25□□□□□ -0.61
RHO-201ENST00000296271 CAMK2GQ13555 558 aaPredicted RBP11.25□□□□□ -0.61
RHO-201ENST00000296271 RUNX3Q13761 415 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 SCARB2Q14108 478 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 MLF2Q15773 248 aaPredicted RBP11.25□□□□□ -0.61
RHO-201ENST00000296271 DGLUCYQ7Z3D6 616 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 CAMKMTQ7Z624 323 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 UBE2Q1Q7Z7E8 422 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 SLC9B2Q86UD5 537 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 SLC5A8Q8N695 610 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 FBXO15Q8NCQ5 510 aaPredicted RBP11.25□□□□□ -0.61
RHO-201ENST00000296271 C11orf65Q8NCR3 313 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 EZH1Q92800 747 aaPredicted RBP11.25□□□□□ -0.61
RHO-201ENST00000296271 THAP11Q96EK4 314 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 LINC00615Q96LM1 132 aaPredicted RBP11.25□□□□□ -0.61
RHO-201ENST00000296271 MAGEB10Q96LZ2 347 aaPredicted RBP11.25□□□□□ -0.61
RHO-201ENST00000296271 ALOXE3Q9BYJ1 711 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 ASPSCR1Q9BZE9 553 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 AICDAQ9GZX7 198 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 CD93Q9NPY3 652 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 TEX10Q9NXF1 929 aaPredicted RBP11.25□□□□□ -0.61
RHO-201ENST00000296271 ORC6Q9Y5N6 252 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 STON1Q9Y6Q2 735 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 SCN2AQ99250 2005 aa11.25□□□□□ -0.61
RHO-201ENST00000296271 A0A1W2PRB8 838 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 A0A1W2PS29 197 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 TOR1BO14657 336 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 PCDH17O14917 1159 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 TMPRSS11DO60235 418 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 GPR37L1O60883 481 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 WBP4O75554 376 aaKnown RBP11.24□□□□□ -0.61
RHO-201ENST00000296271 FADS2O95864 444 aaKnown RBP11.24□□□□□ -0.61
RHO-201ENST00000296271 RECKO95980 971 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 PRIM2P49643 509 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 VASPP50552 380 aaPredicted RBP11.24□□□□□ -0.61
RHO-201ENST00000296271 SNRPNP63162 240 aaKnown RBP11.24□□□□□ -0.61
RHO-201ENST00000296271 SELENOWP63302 87 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 HSPB3Q12988 150 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 PDE7AQ13946 482 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 VEZF1Q14119 521 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 NPTX1Q15818 432 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 HIST2H2ACQ16777 129 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms