RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 C11orf24Q96F05 449 aaPredicted RBP16.91■□□□□ 0.3
CCDC78-201ENST00000293889 MARK4Q96L34 752 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 C1orf50Q9BV19 199 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 SORBS1Q9BX66 1292 aaKnown RBP16.91■□□□□ 0.3
CCDC78-201ENST00000293889 NLNQ9BYT8 704 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 FGF21Q9NSA1 209 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 SIDT1Q9NXL6 827 aaKnown RBP16.91■□□□□ 0.3
CCDC78-201ENST00000293889 G3BP2Q9UN86 482 aaKnown RBP16.91■□□□□ 0.3
CCDC78-201ENST00000293889 H3BMH7 237 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 RTCAO00442 366 aaKnown RBP16.9■□□□□ 0.3
CCDC78-201ENST00000293889 TXNDC9O14530 226 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 ZSCAN9O15535 394 aaPredicted RBP16.9■□□□□ 0.3
CCDC78-201ENST00000293889 ERI3O43414 337 aaKnown RBP16.9■□□□□ 0.3
CCDC78-201ENST00000293889 ALDOCP09972 364 aaKnown RBP16.9■□□□□ 0.3
CCDC78-201ENST00000293889 ZNF888P0CJ79 500 aaPredicted RBP16.9■□□□□ 0.3
CCDC78-201ENST00000293889 CDK4P11802 303 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 EMX2Q04743 252 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 ACSM2AQ08AH3 577 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 COL9A2Q14055 689 aaPredicted RBP16.9■□□□□ 0.3
CCDC78-201ENST00000293889 SMU1Q2TAY7 513 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 SPIN4Q56A73 249 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 TCTE1Q5JU00 501 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 HES3Q5TGS1 186 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 ACSM2BQ68CK6 577 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 TMEM214Q6NUQ4 689 aaKnown RBP16.9■□□□□ 0.3
CCDC78-201ENST00000293889 ABHD17CQ6PCB6 329 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 COMMD6Q7Z4G1 85 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 MARCH9Q86YJ5 346 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 ARHGEF39Q8N4T4 335 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 AGBL5Q8NDL9 886 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 RBM15BQ8NDT2 890 aaKnown RBP16.9■□□□□ 0.3
CCDC78-201ENST00000293889 OR1L3Q8NH93 324 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 ZCCHC10Q8TBK6 192 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 UTP15Q8TED0 518 aaKnown RBP16.9■□□□□ 0.3
CCDC78-201ENST00000293889 ZNF501Q96CX3 271 aaPredicted RBP16.9■□□□□ 0.3
CCDC78-201ENST00000293889 METTL2AQ96IZ6 378 aaKnown RBP16.9■□□□□ 0.3
CCDC78-201ENST00000293889 C17orf62Q9BQA9 187 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 CENPKQ9BS16 269 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 ZNF717Q9BY31 904 aaPredicted RBP16.9■□□□□ 0.3
CCDC78-201ENST00000293889 LHX9Q9NQ69 397 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 IRAK4Q9NWZ3 460 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 OCIAD1Q9NX40 245 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 AHSPQ9NZD4 102 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 MRPS2Q9Y399 296 aaKnown RBP16.9■□□□□ 0.3
CCDC78-201ENST00000293889 KIF26BQ2KJY2 2108 aa16.9■□□□□ 0.3
CCDC78-201ENST00000293889 A0A0G2JN53 185 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 UBDO15205 165 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 NVLO15381 856 aaKnown RBP16.89■□□□□ 0.29
CCDC78-201ENST00000293889 OR2B3O76000 313 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 MT-CO3P00414 261 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 SMIM10L1P0DMW3 83 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 PRDX6P30041 224 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 BSGP35613 385 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 DIO3P55073 304 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 RAB8AP61006 207 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 RAE1P78406 368 aaKnown RBP16.89■□□□□ 0.29
CCDC78-201ENST00000293889 MRPS35P82673 323 aaKnown RBP16.89■□□□□ 0.29
CCDC78-201ENST00000293889 ACY1Q03154 408 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 RCN1Q15293 331 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 METTL21CQ5VZV1 264 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 OR4C11Q6IEV9 310 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 SPATA19Q7Z5L4 167 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 SCUBE1Q8IWY4 988 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 WDR60Q8WVS4 1066 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 GAL3ST3Q96A11 431 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 SMIM10Q96HG1 83 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 FCRL1Q96LA6 429 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 CATSPER2Q96P56 530 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 OR6C1Q96RD1 312 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 ENAMQ9NRM1 1142 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 SIRT5Q9NXA8 310 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 ARMCX1Q9P291 453 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 WASF3Q9UPY6 502 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 DLGAP4Q9Y2H0 992 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 TMED5Q9Y3A6 229 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 POLR3HQ9Y535 204 aaPredicted RBP16.89■□□□□ 0.29
CCDC78-201ENST00000293889 SPTBP11277 2137 aa16.89■□□□□ 0.29
CCDC78-201ENST00000293889 FITM1A5D6W6 292 aa16.88■□□□□ 0.29
CCDC78-201ENST00000293889 URADA6NGE7 173 aa16.88■□□□□ 0.29
CCDC78-201ENST00000293889 EFCAB7A8K855 629 aa16.88■□□□□ 0.29
CCDC78-201ENST00000293889 HYAL3O43820 417 aaPredicted RBP16.88■□□□□ 0.29
CCDC78-201ENST00000293889 CSO75390 466 aaKnown RBP16.88■□□□□ 0.29
CCDC78-201ENST00000293889 EEDO75530 441 aaKnown RBP16.88■□□□□ 0.29
CCDC78-201ENST00000293889 KRT36O76013 467 aa16.88■□□□□ 0.29
CCDC78-201ENST00000293889 B3GALT4O96024 378 aa16.88■□□□□ 0.29
CCDC78-201ENST00000293889 GBAP04062 536 aa16.88■□□□□ 0.29
CCDC78-201ENST00000293889 NCF2P19878 526 aaPredicted RBP16.88■□□□□ 0.29
CCDC78-201ENST00000293889 CPOXP36551 454 aa16.88■□□□□ 0.29
CCDC78-201ENST00000293889 ITGA1P56199 1179 aa16.88■□□□□ 0.29
CCDC78-201ENST00000293889 ACTR3P61158 418 aa16.88■□□□□ 0.29
CCDC78-201ENST00000293889 FOXM1Q08050 763 aa16.88■□□□□ 0.29
CCDC78-201ENST00000293889 FOXC1Q12948 553 aa16.88■□□□□ 0.29
CCDC78-201ENST00000293889 ISXQ2M1V0 245 aa16.88■□□□□ 0.29
CCDC78-201ENST00000293889 IL23RQ5VWK5 629 aa16.88■□□□□ 0.29
CCDC78-201ENST00000293889 NOXRED1Q6NXP6 359 aa16.88■□□□□ 0.29
CCDC78-201ENST00000293889 GALNT18Q6P9A2 607 aa16.88■□□□□ 0.29
CCDC78-201ENST00000293889 TRIM40Q6P9F5 258 aa16.88■□□□□ 0.29
CCDC78-201ENST00000293889 SRFBP1Q8NEF9 429 aaKnown RBP16.88■□□□□ 0.29
CCDC78-201ENST00000293889 KCNC2Q96PR1 638 aa16.88■□□□□ 0.29
CCDC78-201ENST00000293889 TEFMQ96QE5 360 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms