RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 MOCS1Q9NZB8 636 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 HCN2Q9UL51 889 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 CMAHPQ9Y471 501 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 INMT-MINDY4F8WBC2 141 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 TBX18O95935 607 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 HPRP00739 348 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 TACSTD2P09758 323 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 SLC9A3P48764 834 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 EMX2Q04743 252 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 GANABQ14697 944 aaKnown RBP11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 DUOXA1Q1HG43 343 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 TBRG1Q3YBR2 411 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 RABL3Q5HYI8 236 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 C6orf141Q5SZD1 244 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 ADGRF1Q5T601 910 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 KIAA1161Q6NSJ0 714 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 GALNT6Q8NCL4 622 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 MTERF1Q99551 399 aaKnown RBP11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 TRIM36Q9NQ86 728 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 SLC2A4RGQ9NR83 387 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 CCM2LQ9NUG4 571 aaPredicted RBP11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 HPF1Q9NWY4 346 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 FAM120CQ9NX05 1096 aaKnown RBP11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 GALPQ9UBC7 116 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 SCN1AP35498 2009 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 TMEM221A6NGB7 291 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 OR2AG2A6NM03 316 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 M0R296 226 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 VNN2O95498 520 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 NRLP54845 237 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZNF33AQ06730 810 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 PPP1R8Q12972 351 aaKnown RBP11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 HTR3DQ70Z44 454 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 ARMC10Q8N2F6 343 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 OR10G6Q8NH81 332 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 EDAQ92838 391 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 TMEM203Q969S6 136 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 CDKN2AIPNLQ96HQ2 116 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 MUS81Q96NY9 551 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 SLC2A11Q9BYW1 496 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 POLMQ9NP87 494 aaPredicted RBP11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 CNOT11Q9UKZ1 510 aaKnown RBP11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 TRBC2A0A5B9 178 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 C5orf51A6NDU8 294 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 TFPIP10646 304 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 RPS3P23396 243 aaKnown RBP eCLIP11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 S100A2P29034 98 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 CMPK1P30085 196 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 GNALP38405 381 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 STXBP1P61764 594 aaKnown RBP11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 TLR1Q15399 786 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 FRG2Q64ET8 278 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 LRRC70Q7Z2Q7 622 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 CFAP206Q8IYR0 622 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 SPERTQ8NA61 448 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 FGF14Q92915 247 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 NECAB3Q96P71 396 aaPredicted RBP11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 FRG2BQ96QU4 278 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 FAM129BQ96TA1 746 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 BTBD1Q9H0C5 482 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 SLC32A1Q9H598 525 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 PPIEQ9UNP9 301 aaKnown RBP11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 SIT1Q9Y3P8 196 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 FXYD6-FXYD2A0A087WZ82 144 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 BHMG1C9JSJ3 638 aaPredicted RBP11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 OR1I1O60431 355 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 RFPL1O75677 317 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 DBIP07108 87 aaKnown RBP11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 UFM1P61960 85 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 KCNAB2Q13303 367 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 EFR3AQ14156 821 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 SEMA3AQ14563 771 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 DHCR24Q15392 516 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 EOGTQ5NDL2 527 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 NCEH1Q6PIU2 408 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 VITQ6UXI7 678 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 LINGO4Q6UY18 593 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 IER2Q9BTL4 223 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 KLF16Q9BXK1 252 aaPredicted RBP11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 FXYD6Q9H0Q3 95 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 PLEKHA1Q9HB21 404 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 OR1F1O43749 312 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 TPST2O60704 377 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 RBMXL2O75526 392 aaKnown RBP11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 PRNPP04156 253 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 SLC35G6P0C7Q6 338 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZDHHC11BP0C7U3 371 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 LCN1P31025 176 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 RYKP34925 604 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 MAGEA12P43365 314 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 OR3A3P47888 321 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 OR3A2P47893 321 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 CEBPGP53567 150 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 AP2S1P53680 142 aaPredicted RBP11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 CDK6Q00534 326 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 PKDCCQ504Y2 493 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 HSD17B12Q53GQ0 312 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 SPIN4Q56A73 249 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 LY6G5CQ5SRR4 150 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 GALNTL5Q7Z4T8 443 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms