RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 FAM120BQ96EK7 910 aaKnown RBP16.09■□□□□ 0.17
CPSF4-201ENST00000292476 MAGED4Q96JG8 741 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 CAMK1GQ96NX5 476 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 GSDMCQ9BYG8 508 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 PITHD1Q9GZP4 211 aaPredicted RBP16.09■□□□□ 0.17
CPSF4-201ENST00000292476 POLR1BQ9H9Y6 1135 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 BLOC1S6Q9UL45 172 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 CA5BQ9Y2D0 317 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 SPTY2D1-AS1A0A0U1RR47 76 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 KRT87PA6NCN2 255 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 CLIC3O95833 236 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 THEGLP0DJG4 465 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 RAB39AQ14964 217 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 RPE65Q16518 533 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 ALG11Q2TAA5 492 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 NXPE4Q6UWF7 544 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 ENPP6Q6UWR7 440 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 KCTD8Q6ZWB6 473 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 TMPRSS11BQ86T26 416 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 C17orf64Q86WR6 236 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 KRT78Q8N1N4 520 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 ZBTB44Q8NCP5 570 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 ZNF555Q8NEP9 628 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 OR13H1Q8NG92 308 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 ZFPM2Q8WW38 1151 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 TSACCQ96A04 125 aaPredicted RBP16.08■□□□□ 0.17
CPSF4-201ENST00000292476 NRBF2Q96F24 287 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 ING2Q9H160 280 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 IKZF5Q9H5V7 419 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 MAPRE3Q9UPY8 281 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 TSC22D4Q9Y3Q8 395 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 PCDHB14Q9Y5E9 798 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 PCDHGA2Q9Y5H1 932 aa16.08■□□□□ 0.17
CPSF4-201ENST00000292476 CFAP20Q9Y6A4 193 aaKnown RBP16.08■□□□□ 0.17
CPSF4-201ENST00000292476 USP34Q70CQ2 3546 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 OR5K4A6NMS3 321 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 NOL3O60936 208 aaKnown RBP16.08■□□□□ 0.16
CPSF4-201ENST00000292476 DNAJB5O75953 348 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 PRPS1L1P21108 318 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 PTPN6P29350 595 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 SERPINB1P30740 379 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 SOX11P35716 441 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 ACTR1BP42025 376 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 MAGEA2P43356 314 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 TMBIM6P55061 237 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 ACTR1AP61163 376 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 SRSF5Q13243 272 aaKnown RBP16.08■□□□□ 0.16
CPSF4-201ENST00000292476 PMS2P3Q13401 168 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 CLCA4Q14CN2 919 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 HIPK1Q86Z02 1210 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 OR2L8Q8NGY9 312 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 FBXO30Q8TB52 745 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 WDR20Q8TBZ3 569 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 RLN3Q8WXF3 142 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 STARD8Q92502 1023 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 MUS81Q96NY9 551 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 TOR3AQ9H497 397 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 KIR3DX1Q9H7L2 352 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 PELI2Q9HAT8 420 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 PRDM8Q9NQV8 689 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 AASDHPPTQ9NRN7 309 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 GPR27Q9NS67 375 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 FAM118AQ9NWS6 357 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 C3orf18Q9UK00 162 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 DLGAP4Q9Y2H0 992 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 AP1M2Q9Y6Q5 423 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 DOCK9Q9BZ29 2069 aa16.08■□□□□ 0.16
CPSF4-201ENST00000292476 EML5Q05BV3 1969 aa16.07■□□□□ 0.16
CPSF4-201ENST00000292476 FOXE1O00358 373 aaPredicted RBP16.07■□□□□ 0.16
CPSF4-201ENST00000292476 AXIN1O15169 862 aa16.07■□□□□ 0.16
CPSF4-201ENST00000292476 ABCB7O75027 752 aa16.07■□□□□ 0.16
CPSF4-201ENST00000292476 SDC1P18827 310 aa16.07■□□□□ 0.16
CPSF4-201ENST00000292476 SRSF11Q05519 484 aaKnown RBP16.07■□□□□ 0.16
CPSF4-201ENST00000292476 NKG7Q16617 165 aa16.07■□□□□ 0.16
CPSF4-201ENST00000292476 SERPINA11Q86U17 422 aa16.07■□□□□ 0.16
CPSF4-201ENST00000292476 FAM86B1Q8N7N1 296 aa16.07■□□□□ 0.16
CPSF4-201ENST00000292476 OR13F1Q8NGS4 319 aa16.07■□□□□ 0.16
CPSF4-201ENST00000292476 CXorf40BQ96DE9 158 aa16.07■□□□□ 0.16
CPSF4-201ENST00000292476 MTFMTQ96DP5 389 aaKnown RBP16.07■□□□□ 0.16
CPSF4-201ENST00000292476 GABARAPL1Q9H0R8 117 aa16.07■□□□□ 0.16
CPSF4-201ENST00000292476 VPS29Q9UBQ0 182 aa16.07■□□□□ 0.16
CPSF4-201ENST00000292476 PLEKHM1Q9Y4G2 1056 aa16.07■□□□□ 0.16
CPSF4-201ENST00000292476 GNGT2O14610 69 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 PRAMEF4O60810 478 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 PRKD3O94806 890 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 MYO1DO94832 1006 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 CCNDBP1O95273 360 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 F3P13726 295 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 AMD1P17707 334 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 GSTM2P28161 218 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 PKLRP30613 574 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 HOXA6P31267 233 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 SHMT2P34897 504 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 RACK1P63244 317 aaKnown RBP16.06■□□□□ 0.16
CPSF4-201ENST00000292476 PHC1P78364 1004 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 PRAMEF9Q5VWM5 478 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 ERICH5Q6P6B1 374 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 PARGQ86W56 976 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 LAS2Q8IYD9 372 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 PHACTR4Q8IZ21 702 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms