RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ING2Q9H160 280 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 KLHL31Q9H511 634 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 TAAR2Q9P1P5 351 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 SAMD4AQ9UPU9 718 aaKnown RBP17.14■□□□□ 0.33
CAPN1-201ENST00000279247 C1orf226A1L170 272 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 H3BNH8 94 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 EEF1B2P24534 225 aaKnown RBP17.13■□□□□ 0.33
CAPN1-201ENST00000279247 TPMTP51580 245 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 CSNK1G2P78368 415 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 MSANTD1Q6ZTZ1 278 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 ADHFE1Q8IWW8 467 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 EID3Q8N140 333 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 DPH7Q9BTV6 452 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 MS4A8Q9BY19 250 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 MRPS30Q9NP92 439 aaKnown RBP17.13■□□□□ 0.33
CAPN1-201ENST00000279247 SLC17A4Q9Y2C5 497 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 AP3M1Q9Y2T2 418 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 TMPRSS11DO60235 418 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 PIGAP37287 484 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 DCTP40126 519 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 SSR2P43308 183 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 CTBSQ01459 385 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 RPE65Q16518 533 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 UAP1L1Q3KQV9 507 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 TNFAIP8L2Q6P589 184 aaPredicted RBP17.13■□□□□ 0.33
CAPN1-201ENST00000279247 SFTPA2Q8IWL1 248 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 SMYD1Q8NB12 490 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 NFKBIDQ8NI38 313 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.13■□□□□ 0.33
CAPN1-201ENST00000279247 ADNPQ9H2P0 1102 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 RUBCNLQ9H714 662 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 BTNL2Q9UIR0 455 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 ICKQ9UPZ9 632 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 RNASET2O00584 256 aaKnown RBP17.13■□□□□ 0.33
CAPN1-201ENST00000279247 RAB8AP61006 207 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 LRRC32Q14392 662 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 ARHGAP19Q14CB8 494 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 CEP68Q76N32 757 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 R3HCC1LQ7Z5L2 792 aaKnown RBP17.13■□□□□ 0.33
CAPN1-201ENST00000279247 SLC44A3Q8N4M1 653 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 OR2M4Q96R27 311 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 CLK4Q9HAZ1 481 aaKnown RBP17.13■□□□□ 0.33
CAPN1-201ENST00000279247 AHSPQ9NZD4 102 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 AASSQ9UDR5 926 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 ZNF282Q9UDV7 671 aaPredicted RBP17.13■□□□□ 0.33
CAPN1-201ENST00000279247 ZNF451Q9Y4E5 1061 aa17.13■□□□□ 0.33
CAPN1-201ENST00000279247 ATXN8OSP0DMR3 200 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 CXCR2P25025 360 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 GSSP48637 474 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 MANFP55145 182 aaKnown RBP17.12■□□□□ 0.33
CAPN1-201ENST00000279247 PRDX1Q06830 199 aaKnown RBP17.12■□□□□ 0.33
CAPN1-201ENST00000279247 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.12■□□□□ 0.33
CAPN1-201ENST00000279247 ZCCHC7Q8N3Z6 543 aaKnown RBP17.12■□□□□ 0.33
CAPN1-201ENST00000279247 PATE1Q8WXA2 126 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 BHLHE41Q9C0J9 482 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-201ENST00000279247 MYNNQ9NPC7 610 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 SLAMF7Q9NQ25 335 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 ATP6V1HQ9UI12 483 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 PADI4Q9UM07 663 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 SPTBP11277 2137 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 NDUFS4O43181 175 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 IL7RP16871 459 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 MYF6P23409 242 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 GSTT1P30711 240 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 SHMT2P34897 504 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 CPZQ66K79 652 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 TRIM73Q86UV7 250 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 OR10G6Q8NH81 332 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 LCN9Q8WX39 176 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 METTL2AQ96IZ6 378 aaKnown RBP17.12■□□□□ 0.33
CAPN1-201ENST00000279247 TIMM29Q9BSF4 260 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 FAM192AQ9GZU8 254 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 TAS2R9Q9NYW1 312 aa17.12■□□□□ 0.33
CAPN1-201ENST00000279247 DNMT3AQ9Y6K1 912 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-201ENST00000279247 HAT1O14929 419 aa17.11■□□□□ 0.33
CAPN1-201ENST00000279247 C11orf65Q8NCR3 313 aa17.11■□□□□ 0.33
CAPN1-201ENST00000279247 OR52J3Q8NH60 311 aa17.11■□□□□ 0.33
CAPN1-201ENST00000279247 RAB8BQ92930 207 aa17.11■□□□□ 0.33
CAPN1-201ENST00000279247 TRAPPC9Q96Q05 1148 aa17.11■□□□□ 0.33
CAPN1-201ENST00000279247 ZNF717Q9BY31 904 aaPredicted RBP17.11■□□□□ 0.33
CAPN1-201ENST00000279247 ASPSCR1Q9BZE9 553 aa17.11■□□□□ 0.33
CAPN1-201ENST00000279247 FRYLO94915 3013 aa17.11■□□□□ 0.33
CAPN1-201ENST00000279247 H3BSA7 217 aa17.11■□□□□ 0.33
CAPN1-201ENST00000279247 GPR37L1O60883 481 aa17.11■□□□□ 0.33
CAPN1-201ENST00000279247 ERAL1O75616 437 aaKnown RBP17.11■□□□□ 0.33
CAPN1-201ENST00000279247 ERGP11308 486 aa17.11■□□□□ 0.33
CAPN1-201ENST00000279247 BCL6P41182 706 aa17.11■□□□□ 0.33
CAPN1-201ENST00000279247 SPDYE7PQ495Y7 208 aa17.11■□□□□ 0.33
CAPN1-201ENST00000279247 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.11■□□□□ 0.33
CAPN1-201ENST00000279247 ABRAXAS1Q6UWZ7 409 aa17.11■□□□□ 0.33
CAPN1-201ENST00000279247 ABHD11Q8NFV4 315 aa17.11■□□□□ 0.33
CAPN1-201ENST00000279247 OR8K5Q8NH50 307 aa17.11■□□□□ 0.33
CAPN1-201ENST00000279247 BMFQ96LC9 184 aa17.11■□□□□ 0.33
CAPN1-201ENST00000279247 CXorf36Q9H7Y0 433 aa17.11■□□□□ 0.33
CAPN1-201ENST00000279247 SAMHD1Q9Y3Z3 626 aaKnown RBP17.11■□□□□ 0.33
CAPN1-201ENST00000279247 ANHXE9PGG2 379 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 ERI3O43414 337 aaKnown RBP17.1■□□□□ 0.33
CAPN1-201ENST00000279247 FABP3P05413 133 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 BSGP35613 385 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 KCNAB2Q13303 367 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms