RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 WNT5BQ9H1J7 359 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 DEFB129Q9H1M3 183 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 PPP1R3EQ9H7J1 279 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 PTPRHQ9HD43 1115 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 CISHQ9NSE2 258 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 SEC14L3Q9UDX4 400 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 POLG2Q9UHN1 485 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 HACL1Q9UJ83 578 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 SSR3Q9UNL2 185 aa8.88□□□□□ -0.99
PDGFC-201ENST00000274071 BRCA1P38398 1863 aaKnown RBP8.87□□□□□ -0.99
PDGFC-201ENST00000274071 ICAM1P05362 532 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 ADRA2AP08913 450 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 CBR1P16152 277 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 STX4Q12846 297 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 CHAF1BQ13112 559 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 SF3A2Q15428 464 aaKnown RBP8.87□□□□□ -0.99
PDGFC-201ENST00000274071 KLHL26Q53HC5 615 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 TECRLQ5HYJ1 363 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 ACER2Q5QJU3 275 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 FAM102BQ5T8I3 360 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 EFCAB12Q6NXP0 572 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 CPXCR1Q8N123 301 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 CRYBG2Q8N1P7 616 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 L3MBTL4Q8NA19 623 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 NETO2Q8NC67 525 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 NR4A3Q92570 626 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 SCRN2Q96FV2 425 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 PITX2Q99697 317 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 TMEM43Q9BTV4 400 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 ZYG11BQ9C0D3 744 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 GABARAPL1Q9H0R8 117 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 PDLIM7Q9NR12 457 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 DLL4Q9NR61 685 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 PLEKHB1Q9UF11 243 aaPredicted RBP8.87□□□□□ -0.99
PDGFC-201ENST00000274071 POMT2Q9UKY4 750 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 FAM234BA2RU67 622 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 C7orf66A4D0T2 115 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 ANXA2P2A6NMY6 339 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 D6RAR5 112 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 G3V3Q6 166 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 DDX39AO00148 427 aaKnown RBP8.87□□□□□ -0.99
PDGFC-201ENST00000274071 GFRA2O00451 464 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 NIPSNAP2O75323 286 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 CST3P01034 146 aaPredicted RBP8.87□□□□□ -0.99
PDGFC-201ENST00000274071 PSAPP07602 524 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 ENGP17813 658 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 ERCC2P18074 760 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 CTNNB1P35222 781 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 TAS2R39P59534 338 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 SPCS3P61009 180 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 DEFA6Q01524 100 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 SNTB1Q13884 538 aaKnown RBP8.87□□□□□ -0.99
PDGFC-201ENST00000274071 PON3Q15166 354 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 CCDC85BQ15834 202 aaPredicted RBP8.87□□□□□ -0.99
PDGFC-201ENST00000274071 UGT8Q16880 541 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 NBPF12Q5TAG4 269 aaPredicted RBP8.87□□□□□ -0.99
PDGFC-201ENST00000274071 DDI2Q5TDH0 399 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 ESRP1Q6NXG1 681 aaKnown RBP8.87□□□□□ -0.99
PDGFC-201ENST00000274071 B3GNT9Q6UX72 402 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 SSX9Q7RTT3 188 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 ZNF367Q7RTV3 350 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 DNAAF3Q8N9W5 541 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 OR5B17Q8NGF7 314 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 FAM162AQ96A26 154 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 SLC25A46Q96AG3 418 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 SCMH1Q96GD3 660 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 CMTM3Q96MX0 182 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 CCM2Q9BSQ5 444 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 ZCCHC2Q9C0B9 1178 aaKnown RBP8.87□□□□□ -0.99
PDGFC-201ENST00000274071 SEBOXQ9HB31 216 aaPredicted RBP8.87□□□□□ -0.99
PDGFC-201ENST00000274071 C14orf105Q9NVL8 296 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 NDUFAF4Q9P032 175 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 PIAS3Q9Y6X2 628 aa8.87□□□□□ -0.99
PDGFC-201ENST00000274071 FAM95CA0A1B0GW59 222 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 ZNF670-ZNF695F2Z2N8 137 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 CDC7O00311 574 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 MT-CYBP00156 380 aaPredicted RBP8.86□□□□□ -0.99
PDGFC-201ENST00000274071 HIST1H2AGP0C0S8 130 aaPredicted RBP8.86□□□□□ -0.99
PDGFC-201ENST00000274071 MUC1P15941 1255 aaPredicted RBP8.86□□□□□ -0.99
PDGFC-201ENST00000274071 SPI1P17947 270 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 PVALBP20472 110 aaPredicted RBP8.86□□□□□ -0.99
PDGFC-201ENST00000274071 HIST1H2ADP20671 130 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 NMBRP28336 390 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 SLC6A1P30531 599 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 VEGFCP49767 419 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 TNFRSF17Q02223 184 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 SLC3A1Q07837 685 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 CTBP1Q13363 440 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 TMEM44Q2T9K0 475 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 TEX30Q5JUR7 227 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 FAM102AQ5T9C2 384 aaPredicted RBP8.86□□□□□ -0.99
PDGFC-201ENST00000274071 CD276Q5ZPR3 534 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 HIST2H2AA3Q6FI13 130 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 ALKAL2Q6UX46 152 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 OR10A6Q8NH74 314 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 MS4A3Q96HJ5 214 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 HIST1H2AHQ96KK5 128 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 HRASLS5Q96KN8 279 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 PPP3R2Q96LZ3 170 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 HIST1H2AJQ99878 128 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms