RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 PIM1P11309 404 aaPredicted RBP13.52□□□□□ -0.25
SSBP1-201ENST00000265304 HIST1H1TP22492 207 aaPredicted RBP13.52□□□□□ -0.25
SSBP1-201ENST00000265304 ATP5A1P25705 553 aaKnown RBP13.52□□□□□ -0.25
SSBP1-201ENST00000265304 MTTPP55157 894 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 TOR1AIP1Q5JTV8 583 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 FAM219BQ5XKK7 198 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 TRIM40Q6P9F5 258 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 COX15Q7KZN9 410 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 OVCH1Q7RTY7 1134 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 NLGN4XQ8N0W4 816 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 ACOT4Q8N9L9 421 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 NLGN4YQ8NFZ3 816 aaPredicted RBP13.52□□□□□ -0.25
SSBP1-201ENST00000265304 OR2T11Q8NH01 316 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.52□□□□□ -0.257e-10■■□□□ 14.1
SSBP1-201ENST00000265304 FGF11Q92914 225 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 NKD1Q969G9 470 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 MTFMTQ96DP5 389 aaKnown RBP13.52□□□□□ -0.25
SSBP1-201ENST00000265304 MAELQ96JY0 434 aaKnown RBP13.52□□□□□ -0.25
SSBP1-201ENST00000265304 SERINC2Q96SA4 455 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 C17orf62Q9BQA9 187 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 CENPKQ9BS16 269 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 AKIRIN1Q9H9L7 192 aaPredicted RBP13.52□□□□□ -0.25
SSBP1-201ENST00000265304 MEAF6Q9HAF1 191 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 ANKHQ9HCJ1 492 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 ZNF304Q9HCX3 659 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 LYRM4Q9HD34 91 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 PRDM9Q9NQV7 894 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 TXLNGQ9NUQ3 528 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 WBP11Q9Y2W2 641 aaKnown RBP13.52□□□□□ -0.25
SSBP1-201ENST00000265304 MAP4K5Q9Y4K4 846 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 PCDHGA6Q9Y5G7 932 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 NUP214P35658 2090 aaPredicted RBP13.52□□□□□ -0.25
SSBP1-201ENST00000265304 MAP1BP46821 2468 aaKnown RBP13.52□□□□□ -0.25
SSBP1-201ENST00000265304 A0A088AWK7 358 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 A0A0A6YYD5 115 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 PIP5K1BO14986 540 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 LSM1O15116 133 aaKnown RBP13.51□□□□□ -0.25
SSBP1-201ENST00000265304 CRCPO75575 148 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 STATHP02808 62 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 JUNP05412 331 aaKnown RBP13.51□□□□□ -0.25
SSBP1-201ENST00000265304 SERPIND1P05546 499 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 CYC1P08574 325 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 LIPCP11150 499 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 ZNF10P21506 573 aaPredicted RBP13.51□□□□□ -0.25
SSBP1-201ENST00000265304 STAT5AP42229 794 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 AVPR1BP47901 424 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 GUCY1A3Q02108 690 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 BTKQ06187 659 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 DDX39BQ13838 428 aaKnown RBP13.51□□□□□ -0.25
SSBP1-201ENST00000265304 DEFB134Q4QY38 66 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 SPIN4Q56A73 249 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 SGO1Q5FBB7 561 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 FOXR1Q6PIV2 292 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 ZNF793Q6ZN11 406 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 PRSS41Q7RTY9 318 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 CRLF3Q8IUI8 442 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 WDR75Q8IWA0 830 aaKnown RBP13.51□□□□□ -0.25
SSBP1-201ENST00000265304 GALNT6Q8NCL4 622 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 OR9A4Q8NGU2 314 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 CLIP3Q96DZ5 547 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 C3orf30Q96M34 536 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 WDR54Q9H977 334 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 NAALAD2Q9Y3Q0 740 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 AK5Q9Y6K8 562 aa13.51□□□□□ -0.25
SSBP1-201ENST00000265304 MED13Q9UHV7 2174 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 A0A0A6YYC8 382 aaPredicted RBP13.5□□□□□ -0.25
SSBP1-201ENST00000265304 C21orf140B9A014 251 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 I3L1I5 382 aaPredicted RBP13.5□□□□□ -0.25
SSBP1-201ENST00000265304 AGRPO00253 132 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 RGS14O43566 566 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 RAD1O60671 282 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 VPS4BO75351 444 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 PCSK2P16519 638 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 IL1RNP18510 177 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 AGXTP21549 392 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 ALAS2P22557 587 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 TPP2P29144 1249 aaPredicted RBP13.5□□□□□ -0.25
SSBP1-201ENST00000265304 GSTM5P46439 218 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 RAB8AP61006 207 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 TRA2BP62995 288 aaKnown RBP13.5□□□□□ -0.25
SSBP1-201ENST00000265304 RAE1P78406 368 aaKnown RBP13.5□□□□□ -0.25
SSBP1-201ENST00000265304 FOXK2Q01167 660 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 RUNX2Q13950 521 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 AP5B1Q2VPB7 878 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 TUBB8Q3ZCM7 444 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 LCN10Q6JVE6 187 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 OGFOD2Q6N063 350 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 EPGNQ6UW88 154 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 FAM198BQ6UWH4 519 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 LARP4Q71RC2 724 aaKnown RBP eCLIP13.5□□□□□ -0.259e-8■■■□□ 15.8
SSBP1-201ENST00000265304 PAGE2Q7Z2X7 111 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 MAVSQ7Z434 540 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 COMMD6Q7Z4G1 85 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 ZFAND4Q86XD8 727 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 PARP9Q8IXQ6 854 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 DTWD1Q8N5C7 304 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 CCT6BQ92526 530 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 C19orf60Q96EN9 201 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 OR1F2PQ96R84 312 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 HBEGFQ99075 208 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms