RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 TCTE3Q8IZS6 198 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 ARMC10Q8N2F6 343 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 DNAAF1Q8NEP3 725 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 PXT1Q8NFP0 134 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 RPLP0P6Q8NHW5 317 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 NOL4LQ96MY1 436 aaPredicted RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 PWWP2AQ96N64 755 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 TMEM209Q96SK2 561 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 MINDY3Q9H8M7 445 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 RPF1Q9H9Y2 349 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 PDP1Q9P0J1 537 aaPredicted RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 PAK5Q9P286 719 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 DNAJB9Q9UBS3 223 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC27A6Q9Y2P4 619 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 SCAMP3O14828 347 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 FABP7O15540 132 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 RRP8O43159 456 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 DCNP07585 359 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 BPGMP07738 259 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 NQO2P16083 231 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 UGT2B7P16662 529 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 RAB6AP20340 208 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 CCR7P32248 378 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 ETV6P41212 452 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 OR1G1P47890 313 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 LUMP51884 338 aaPredicted RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 CXCL9Q07325 125 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 GANABQ14697 944 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 TEX261Q6UWH6 196 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 CXXC5Q7LFL8 322 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 SAMD7Q7Z3H4 446 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 MIER2Q8N344 545 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 CCDC107Q8WV48 283 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC6A16Q9GZN6 736 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC26A1Q9H2B4 701 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 PIGMQ9H3S5 423 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 EMC7Q9NPA0 242 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 U3KQ87 197 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 PLSCR5A0PG75 271 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 TMEM82A0PJX8 343 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 EIF3DO15371 548 aaKnown RBP eCLIP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 SIAH2O43255 324 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 LYRM1O43325 122 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 OR10H3O60404 316 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 EIF1BO60739 113 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 FKTNO75072 461 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 ATP6AP2O75787 350 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 PCCBP05166 539 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 UBBP0CG47 229 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 UBCP0CG48 685 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 GKP32189 559 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 EIF1P41567 113 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 RPL23AP62750 156 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 RPS27AP62979 156 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 UBA52P62987 128 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 YWHAZP63104 245 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 SERINC3Q13530 473 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 RAB31Q13636 194 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 TMEM41BQ5BJD5 291 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 TOR1AIP1Q5JTV8 583 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 LPCAT3Q6P1A2 487 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC22A25Q6T423 547 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 LGI2Q8N0V4 545 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 RYBPQ8N488 228 aaPredicted RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 OR5L2Q8NGL0 311 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 OR1J4Q8NGS1 313 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 OR13C2Q8NGS9 318 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 RNF34Q969K3 372 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 AKT1S1Q96B36 256 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 MAP3K3Q99759 626 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 MED10Q9BTT4 135 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 PLLPQ9Y342 182 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF587BE7ETH6 402 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 LRRTM2O43300 516 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 GRID2O43424 1007 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 PRH1P02810 166 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 FGRP09769 529 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 GKN3PP0CG01 181 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 UGT2B10P36537 528 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 MC3RP41968 323 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 P2RY4P51582 365 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 CCR6P51684 374 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 ACTBP60709 375 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 ACTG1P63261 375 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 RBP5P82980 135 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 PLA2G7Q13093 441 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 DUSP4Q13115 394 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 EXOSC2Q13868 293 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 PGM5Q15124 567 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 NDUFA9Q16795 377 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 PHTF2Q8N3S3 785 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 RPL10LQ96L21 214 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 CYP2S1Q96SQ9 504 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 ACSS3Q9H6R3 686 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 MGAT4CQ9UBM8 478 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 HIF3AQ9Y2N7 669 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 LAMB4A4D0S4 1761 aa6.52□□□□□ -1.36
PDGFRA-201ENST00000257290 F5H0A9 414 aaPredicted RBP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 ADAMDEC1O15204 470 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 CYBBP04839 570 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms