RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 CCR3P51677 355 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 DUS1LQ6P1R4 473 aaKnown RBP18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 TMIGD1Q6UXZ0 262 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 ERN2Q76MJ5 926 aaKnown RBP18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 ABHD11Q8NFV4 315 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 LZICQ8WZA0 190 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 FEVQ99581 238 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 TMEM245Q9H330 911 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 RLIMQ9NVW2 624 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 TAS2R9Q9NYW1 312 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 ALPK3Q96L96 1907 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 PI15O43692 258 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 VEGFDO43915 354 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 TBX6O95947 436 aaPredicted RBP18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 GSSP48637 474 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 PPIGQ13427 754 aaKnown RBP eCLIP18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 CLCA4Q14CN2 919 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 TMEM52BQ4KMG9 183 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 FAM78AQ5JUQ0 283 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 SYT6Q5T7P8 510 aaPredicted RBP18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 FAM129CQ86XR2 697 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 OR52J3Q8NH60 311 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 GIPC3Q8TF64 312 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 YIPF6Q96EC8 236 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 SLC6A16Q9GZN6 736 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 TMEM38AQ9H6F2 299 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 ACOT13Q9NPJ3 140 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 SLC23A2Q9UGH3 650 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 RGS10O43665 173 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 VIPP01282 170 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 PRIM2P49643 509 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 UBE3AQ05086 875 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 IFI44LQ53G44 452 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 UNC5DQ6UXZ4 953 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 PARP8Q8N3A8 854 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 SLC5A8Q8N695 610 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 OR4C15Q8NGM1 316 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 SETD7Q8WTS6 366 aaKnown RBP18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 SMG7Q92540 1137 aaKnown RBP18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 PPP1R16AQ96I34 528 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 SIGLEC11Q96RL6 698 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 TAAR2Q9P1P5 351 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 TDRKHQ9Y2W6 561 aaKnown RBP18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 A0A1W2PRB8 838 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 ADAMDEC1O15204 470 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 TPP2P29144 1249 aaPredicted RBP18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 CHI3L1P36222 383 aaPredicted RBP18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 RPL3P39023 403 aaKnown RBP18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 P2RY2P41231 377 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 CDK6Q00534 326 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 RBBP4Q09028 425 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 FADDQ13158 208 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 DGCR6Q14129 220 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 ADPRMQ3LIE5 342 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 LCTLQ6UWM7 567 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 AHSA2Q719I0 299 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 PDZD3Q86UT5 571 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 OXR1Q8N573 874 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 DNASE1L2Q92874 299 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 ZNF300Q96RE9 604 aaPredicted RBP18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 RNF6Q9Y252 685 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 CFAP20Q9Y6A4 193 aaKnown RBP18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 CCDC88CQ9P219 2028 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 C2orf16Q68DN1 1984 aa18.68■□□□□ 0.58
CDC42EP1-201ENST00000249014 J3KTA2 159 aa18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 MYOGP15173 224 aa18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 FUT4P22083 530 aa18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 PTX3P26022 381 aaPredicted RBP18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 SOAT1P35610 550 aa18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 LSM3P62310 102 aaKnown RBP18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 FPGSQ05932 587 aa18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 TRIM40Q6P9F5 258 aa18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 TMC5Q6UXY8 1006 aa18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 CCDC80Q76M96 950 aa18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 SLC9B2Q86UD5 537 aa18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 SMYD1Q8NB12 490 aa18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 TRUB1Q8WWH5 349 aaKnown RBP18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 RAD51AP1Q96B01 352 aa18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 MTERF3Q96E29 417 aa18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 COX14Q96I36 57 aa18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 DYRK4Q9NR20 520 aa18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 TM7SF3Q9NS93 570 aa18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 TSC22D4Q9Y3Q8 395 aa18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 DOCK9Q9BZ29 2069 aa18.67■□□□□ 0.58
CDC42EP1-201ENST00000249014 NFATC1O95644 943 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 PSMB9P28065 219 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 ALDH4A1P30038 563 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 OPRL1P41146 370 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 RXRGP48443 463 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 CDH12P55289 794 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 SPIBQ01892 262 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 C16orf87Q6PH81 154 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 PRSS48Q7RTY5 328 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 OR10G2Q8NGC3 310 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 NDNFQ8TB73 568 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 CXorf40AQ8TE69 158 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 TFGQ92734 400 aaPredicted RBP18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 UBE2E3Q969T4 207 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 NIPSNAP1Q9BPW8 284 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 LGR4Q9BXB1 951 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms