RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 APOA1P02647 267 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 RPLP0P05388 317 aaKnown RBP12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 KCNJ10P78508 379 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 VEZF1Q14119 521 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 LEXMQ3ZCV2 418 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 TPRG1LQ5T0D9 272 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 CCDC71Q8IV32 467 aaPredicted RBP12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 ZFYVE19Q96K21 471 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 DDX28Q9NUL7 540 aaKnown RBP12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 GIN1Q9NXP7 522 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 DNAJC27Q9NZQ0 273 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 PIPSLA2A3N6 862 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 SMIM30A4D0T7 59 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 WBP4O75554 376 aaKnown RBP12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 DNAJB5O75953 348 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 ALPPL2P10696 532 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 SOX6P35712 828 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 METAP1P53582 386 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 MAPK12P53778 367 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 CNTN1Q12860 1018 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 MTAPQ13126 283 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 SYT6Q5T7P8 510 aaPredicted RBP12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 ARMCX6Q7L4S7 300 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 GPR65Q8IYL9 337 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 KBTBD8Q8NFY9 601 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 OR52E4Q8NGH9 312 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 WDR20Q8TBZ3 569 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 ECHDC3Q96DC8 303 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 YIPF4Q9BSR8 244 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 CPEB1Q9BZB8 566 aaKnown RBP12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 ZCCHC2Q9C0B9 1178 aaKnown RBP12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 CLN6Q9NWW5 311 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 SH2B3Q9UQQ2 575 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 POFUT2Q9Y2G5 429 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 K7ESM1 405 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 SCN2BO60939 215 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 FKTNO75072 461 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 ERAL1O75616 437 aaKnown RBP12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 KRT75O95678 551 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 PPM1AP35813 382 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 RAB15P59190 212 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 CASP12Q6UXS9 341 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 GGHQ92820 318 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 NRTNQ99748 197 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 NEURL2Q9BR09 285 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 TAS2R9Q9NYW1 312 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 TAC3Q9UHF0 121 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 F5P12259 2224 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 SNPHO15079 494 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 ADAM23O75077 832 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 APOL3O95236 402 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 PTHP01270 115 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 DGKGP49619 791 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 ZNF805Q5CZA5 627 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 DEPDC1Q5TB30 811 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 MSANTD1Q6ZTZ1 278 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 FAM217AQ8IXS0 508 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 RBM12BQ8IXT5 1001 aaKnown RBP12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 SYNPOQ8N3V7 929 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 GANCQ8TET4 914 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 SLC5A11Q8WWX8 675 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 ZNF300Q96RE9 604 aaPredicted RBP12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 CNPPD1Q9BV87 410 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 MARCH7Q9H992 704 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 SPATA6Q9NWH7 488 aaPredicted RBP12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 KLHL42Q9P2K6 505 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 HCFC2Q9Y5Z7 792 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 HSPE1-MOB4S4R3N1 261 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 AGAP14A8MT82 685 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 SLC28A2O43868 658 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 AP2A2O94973 939 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 PCDH8O95206 1070 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 C1GALT1C1LP0DN25 315 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 SLC19A1P41440 591 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 WASP42768 502 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 NKX2-5P52952 324 aaPredicted RBP12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 DSTNP60981 165 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 C10orf62Q5T681 223 aaPredicted RBP12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 TMIGD1Q6UXZ0 262 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 LIPIQ6XZB0 460 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 GRASPQ7Z6J2 395 aaPredicted RBP12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 C16orf78Q8WTQ4 265 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 EFCAB11Q9BUY7 163 aa12.08□□□□□ -0.48
RAB3IP-201ENST00000247833 PRAMEF33A0A0G2JMD5 474 aa12.07□□□□□ -0.48
RAB3IP-201ENST00000247833 CLCA1A8K7I4 914 aa12.07□□□□□ -0.48
RAB3IP-201ENST00000247833 PRAMEF10O60809 474 aa12.07□□□□□ -0.48
RAB3IP-201ENST00000247833 SLCO2B1O94956 709 aa12.07□□□□□ -0.48
RAB3IP-201ENST00000247833 RHOP08100 348 aa12.07□□□□□ -0.48
RAB3IP-201ENST00000247833 ZNF8P17098 575 aaPredicted RBP12.07□□□□□ -0.48
RAB3IP-201ENST00000247833 CD6P30203 668 aa12.07□□□□□ -0.48
RAB3IP-201ENST00000247833 GRK3P35626 688 aa12.07□□□□□ -0.48
RAB3IP-201ENST00000247833 GGT2P36268 569 aa12.07□□□□□ -0.48
RAB3IP-201ENST00000247833 CXCR4P61073 352 aa12.07□□□□□ -0.48
RAB3IP-201ENST00000247833 HTRA3P83110 453 aa12.07□□□□□ -0.48
RAB3IP-201ENST00000247833 KCNC3Q14003 757 aa12.07□□□□□ -0.48
RAB3IP-201ENST00000247833 SLCO4C1Q6ZQN7 724 aa12.07□□□□□ -0.48
RAB3IP-201ENST00000247833 PLEKHG7Q6ZR37 379 aa12.07□□□□□ -0.48
RAB3IP-201ENST00000247833 PARS2Q7L3T8 475 aaKnown RBP12.07□□□□□ -0.48
RAB3IP-201ENST00000247833 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.07□□□□□ -0.48
RAB3IP-201ENST00000247833 CADM3Q8N126 398 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms