RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 CDRT1O95170 752 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 RASGRP1O95267 797 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 IFNA16P05015 189 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 ANXA8P13928 327 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 BRAT1Q6PJG6 821 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 ASB18Q6ZVZ8 466 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 OR4N5Q8IXE1 308 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 ZNF420Q8TAQ5 688 aaPredicted RBP13.17□□□□□ -0.3
NCLN-201ENST00000246117 PXYLP1Q8TE99 480 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 SLC38A2Q96QD8 506 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 KLF16Q9BXK1 252 aaPredicted RBP13.17□□□□□ -0.3
NCLN-201ENST00000246117 RBCK1Q9BYM8 510 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 SLC6A13Q9NSD5 602 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 CRNNQ9UBG3 495 aaPredicted RBP13.17□□□□□ -0.3
NCLN-201ENST00000246117 ZNF232Q9UNY5 417 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 TLR4O00206 839 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 TCEA1P23193 301 aaKnown RBP13.17□□□□□ -0.3
NCLN-201ENST00000246117 ARL4DP49703 201 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 CD83Q01151 205 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 PIN1Q13526 163 aaPredicted RBP13.17□□□□□ -0.3
NCLN-201ENST00000246117 PLET1Q6UQ28 207 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 LAPTM4BQ86VI4 370 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 ZNF433Q8N7K0 673 aaPredicted RBP13.17□□□□□ -0.3
NCLN-201ENST00000246117 POF1BQ8WVV4 589 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 SLC5A11Q8WWX8 675 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 SLC35G5Q96KT7 338 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 ZSCAN5AQ9BUG6 496 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 MTIF3Q9H2K0 278 aaKnown RBP13.17□□□□□ -0.3
NCLN-201ENST00000246117 BEX1Q9HBH7 125 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 FAM120CQ9NX05 1096 aaKnown RBP13.17□□□□□ -0.3
NCLN-201ENST00000246117 ENOPH1Q9UHY7 261 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 ZNF780BQ9Y6R6 833 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 FOCADQ5VW36 1801 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 A0A1W2PPK0 400 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 NDUFS4O43181 175 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 SOCS5O75159 536 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 JUPP14923 745 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 NT5EP21589 574 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 CCT3P49368 545 aaKnown RBP13.17□□□□□ -0.3
NCLN-201ENST00000246117 TMBIM6P55061 237 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 COX10Q12887 443 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 GAREM2Q75VX8 874 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 HDDC3Q8N4P3 179 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 OSBPL10Q9BXB5 764 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.17□□□□□ -0.3
NCLN-201ENST00000246117 STOX2Q9P2F5 926 aaPredicted RBP13.17□□□□□ -0.3
NCLN-201ENST00000246117 RPS6KB2Q9UBS0 482 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 OR10H2O60403 315 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 CSTF2P33240 577 aaKnown RBP eCLIP13.17□□□□□ -0.3
NCLN-201ENST00000246117 OLR1P78380 273 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 DLEU7Q6UYE1 221 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 OR4E2Q8NGC2 313 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 OR5AR1Q8NGP9 310 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 PHOX2BQ99453 314 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 YTHDF1Q9BYJ9 559 aaKnown RBP13.17□□□□□ -0.3
NCLN-201ENST00000246117 SPHK2Q9NRA0 654 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 PCDHB11Q9Y5F2 797 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 ABHD14A-ACY1A0A1B0GW23 586 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 PSMB5P28074 263 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 TIA1P31483 386 aaKnown RBP eCLIP13.16□□□□□ -0.3
NCLN-201ENST00000246117 CNR2P34972 360 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 MAGEA10P43363 369 aaPredicted RBP13.16□□□□□ -0.3
NCLN-201ENST00000246117 MGAT3Q09327 533 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 GRIK2Q13002 908 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 CCDC157Q569K6 752 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 HSDL2Q6YN16 418 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 MACC1Q6ZN28 852 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 ZFP3Q96NJ6 502 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 EFCAB11Q9BUY7 163 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 AMBRA1Q9C0C7 1298 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 REEP4Q9H6H4 257 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 COL11A1P12107 1806 aaPredicted RBP13.16□□□□□ -0.3
NCLN-201ENST00000246117 FABP12A6NFH5 140 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 NPPAP01160 153 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 RB1P06400 928 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 H1F0P07305 194 aaKnown RBP13.16□□□□□ -0.3
NCLN-201ENST00000246117 PIM1P11309 404 aaPredicted RBP13.16□□□□□ -0.3
NCLN-201ENST00000246117 LHCGRP22888 699 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 SSTR4P31391 388 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 RPL3P39023 403 aaKnown RBP13.16□□□□□ -0.3
NCLN-201ENST00000246117 IL12RB1P42701 662 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 CSNK1DP48730 415 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 ATP12AP54707 1039 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 CAMK1Q14012 370 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 LRRC32Q14392 662 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 ZFP69Q49AA0 526 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 BCDIN3DQ7Z5W3 292 aaKnown RBP13.16□□□□□ -0.3
NCLN-201ENST00000246117 OR10H4Q8NGA5 316 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 OR5D16Q8NGK9 328 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 LCN9Q8WX39 176 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 ARSGQ96EG1 525 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 TEFMQ96QE5 360 aaKnown RBP13.16□□□□□ -0.3
NCLN-201ENST00000246117 MGLLQ99685 303 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 DOHHQ9BU89 302 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 HEBP1Q9NRV9 189 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 TMEM9Q9P0T7 183 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 KRR1Q13601 381 aaKnown RBP13.16□□□□□ -0.3
NCLN-201ENST00000246117 IZUMO1Q8IYV9 350 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 PDPRQ8NCN5 879 aa13.16□□□□□ -0.3
NCLN-201ENST00000246117 VMP1Q96GC9 406 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms